Selected Publications for Center:

EAGLES - Atlantic Coast Environmental Indicators Consortium

Grant Number R828677

Book Chapter (9)
Journal Article (88)
Report (2)
Reference Type Reference Title Journal Author Citation Progress Report Year Document Sources
Book Chapter Evaluating indicators of seagrass stress to light. None Biber PD, Paerl HW, Gallegos CL, Kenworthy WJ Biber PD, Paerl HW, Gallegos CL, Kenworthy WJ. Evaluating indicators of seagrass stress to light. In: Bortone SA, ed. Estuarine Indicators. Boca Raton, FL: CRC Press, 2004, Chapter 13, 193-209. R828677C004 (2004)
R828677C004 (Final)
R828684 (Final)
R828684C002 (2003)
Book Chapter Aircraft remote sensing. None Harding LW, Miller WD, Swift RN, Wright CW Harding LW, Miller WD, Swift RN, Wright CW. Aircraft remote sensing. In:Steele JH, Thorpe SA, Turekian KK, eds. Encyclopedia of Ocean Sciences. London, UK: Academic Press, 2001, pp. 113-122. R826941 (Final)
R828677 (2001)
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Book Chapter Water quality and fisheries habitat changes in the Pamlico Sound after three hurricanes: a short-term and long-term perspective. None Paerl HW, Buzzelli CP, Go M, Peierls BL, Luettich RA, Richardson TL, Ramus JS, Eby LE, Crowder LB, Ausley LW, Overton J, Bales JD Paerl HW, Buzzelli CP, Go M, Peierls BL, Luettich RA, Richardson TL, Ramus JS, Eby LE, Crowder LB, Ausley LW, Overton J, Bales JD. Water quality and fisheries habitat changes in the Pamlico Sound after three hurricanes: a short-term and long-term perspective. In: Maiolo JR, Whitehead JC, McGee M, King L, Johnson J, Stone H, eds. Facing Our Future: Hurricane Floyd and Recovery in the Coastal Plain. Wilmington: Coastal Carolina Press, 2001, pp. 255-263. R826938 (Final)
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Book Chapter Microbial aggregates and consortia. None Paerl HW, Kuparinen J Paerl HW, Kuparinen J. Microbial aggregates and consortia. In:Bitton G, ed. Encyclopedia of Environmental Microbiology (Vol. 1). New York, NY: John Wiley and Sons, 2002, pp. 160-181. R828677C001 (Final)
Book Chapter Primary productivity and producers. None Paerl HW Paerl HW. Primary productivity and producers. In: Hurst CJ, Crawford RL, Knudsen GR, McInerney MJ, Stetzenbach LD, Walter MV, eds. Manual of Environmental Microbiology (2nd Ed.). Washington, DC: ASM Press, 2002, pp. 329-341. R828677C001 (Final)
Book Chapter Using microalgal indicators to assess human- and climate-induced ecological change in estuaries None Paerl HW, Dyble J, Pinckney JL, Valdes LM, Moisander PH, Morris JT, Bendis B, Piehler MF, Bortone SA Paerl HW, Dyble J, Pinckney JL, Valdes LM, Moisander PH, Morris JT, Bendis B, Piehler MF, Bortone SA. Using microalgal indicators to assess human- and climate-induced ecological change in estuaries. CRC Press, Boca Raton, FL. 2005:145-174 R828677C001 (2003)
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Book Chapter Nitrogen and marine eutrophication. None Paerl HW, Piehler MF Paerl HW, Piehler MF. Nitrogen and marine eutrophication. In: Capone DG, Bronk DA, Mulholland MR, Carpenter EJ, eds. Nitrogen in the Marine Environment (Second Edition). Orlando, FL: Academic Press, 2008, Chapter 11, pp. 529-567. R828677 (Final)
Book Chapter Nutrient and other environmental controls of harmful cyanobacterial blooms along the freshwater--marine continuum. None Paerl HW Paerl H. Nutrient and other environmental controls of harmful cyanobacterial blooms along the freshwater--marine continuum. In:Hudnell HK, ed. Cyanobacterial Harmful Algal Blooms:State of the Science and Research Needs, Volume 619. New York, NY: Springer, 2008, pp. 217-237. R828677 (Final)
Book Chapter Effects of low tide rainfall on intertidal zone material cycling. None Torres R, Goni MA, Voulgaris GV, Lovell CR, Morris JT Torres R, Goni MA, Voulgaris GV, Lovell CR, Morris JT. Effects of low tide rainfall on intertidal zone material cycling. In: Fagherazzi S, Marani M, Blum LK, eds. The Ecogeomorphology of Tidal Marshes. Coastal and Estuarine Studies, Volume 59. Washington, DC: American Geophysical Union, 2004, pp. 93-114. R828677 (Final)
R828677C003 (2004)
R828677C003 (Final)
Journal Article Remotely-sensed chl a at the Chesapeake Bay mouth is correlated with annual freshwater flow to Chesapeake Bay. GEOPHYSICAL RESEARCH LETTERS Acker JG, Harding LW, Leptoukh G, Zhu T, Shen S Acker JG, Harding LW, Leptoukh G, Zhu T, Shen S. Remotely-sensed chl a at the Chesapeake Bay mouth is correlated with annual freshwater flow to Chesapeake Bay. Geophysical Research Letters 2005;32(5):L05601, doi:10.1029/2004GL021852. R828677 (Final)
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Journal Article The balance of autotrophy and heterotrophy during mixotrophic growth of Karlodinium micrum (Dinophyceae). JOURNAL OF PLANKTON RESEARCH Adolf JE, Stoecker DK, Harding Jr. LW Adolf JE, Stoecker DK, Harding Jr. LW. The balance of autotrophy and heterotrophy during mixotrophic growth of Karlodinium micrum (Dinophyceae). Journal of Plankton Research 2006;28(8):737-751. R828677 (Final)
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Journal Article Environmental forcing of phytoplankton floral composition, biomass, and primary productivity in Chesapeake Bay, USA. ESTUARINE COASTAL AND SHELF SCIENCE Adolf JE, Yeager CL, Miller WD, Mallonee ME, Harding LW Adolf JE, Yeager CL, Miller WD, Mallonee ME, Harding Jr. LW. Environmental forcing of phytoplankton floral composition, biomass, and primary productivity in Chesapeake Bay, USA. Estuarine Coastal and Shelf Science 2006;67(1-2):108-122. R828677 (Final)
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Journal Article Application of Bayesian structural equation modeling for examining phytoplankton dynamics in the Neuse River Estuary (North Carolina, USA). ESTUARINE, COASTAL AND SHELF SCIENCE Arhonditsis GB, Paerl HW, Valdes-Weaver LM, Stow CA, Steinberg LJ, Reckhow KH Arhonditsis GB, Paerl HW, Valdes-Weaver LM, Stow CA, Steinberg LJ, Reckhow KH. Application of Bayesian structural equation modeling for examining phytoplankton dynamics in the Neuse River Estuary (North Carolina, USA). Estuarine, Coastal and Shelf Science 2007;72(1-2):63-80. R828677 (Final)
Journal Article Delineation of the role of nutrient dynamics and hydrologic forcing on phytoplankton patterns along a freshwater-marine continuum. None Arhonditsis GB, Stow CA, Paerl HW, Valdes-Weaver LM, Steinberg LJ, Reckhow KH Arhonditsis GB, Stow CA, Paerl HW, Valdes-Weaver LM, Steinberg LJ, Reckhow KH. Delineation of the role of nutrient dynamics and hydrologic forcing on phytoplankton patterns along a freshwater-marine continuum. Ecological Modelling 2007;208(2-4):230-246. R828677 (Final)
Journal Article Modeling the dynamics of three functional groups of macroalgae in tropical seagrass habitats. ECOLOGICAL MODELLING Biber PD, Harwell MA, Cropper WP Biber PD, Harwell MA, Cropper, Jr. WP. Modeling the dynamics of three functional groups of macroalgae in tropical seagrass habitats. Ecological Modeling (accepted, 2003). R827453 (2002)
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Journal Article Measuring the effects of salinity stress in the Red Mangrove, Rhizophora Mangle L. JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY Biber PD, Snedaker SC

Biber PD, Snedaker SC. Measuring the effects of salinity stress in the Red Mangrove, Rhizophora Mangle L. Journal of Experimental Marine Biology and Ecology (submitted, 2005).

R828677C004 (2004)
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Journal Article Hydroponic versus rooted growth of Zostera marina L. (Eelgrass). HYDROBIOLOGIA Biber PD Biber PD. Hydroponic versus rooted growth of Zostera marina L. (Eelgrass). Hydrobiologia 2006;568(1):489-492. R828677 (Final)
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Journal Article Temporal and spatial dynamics of macroalgal communities along an anthropogenic salinity gradient in Biscayne Bay. AQUATIC BOTANY Biber PD, Irlandi EA Biber PD, Irlandi EA. Temporal and spatial dynamics of macroalgal communities along an anthropogenic salinity gradient in Biscayne Bay. Aquatic Botany 2006;85(1):65-77. R828677C004 (Final)
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Journal Article Calibration of a bio-optical model in the North River, North Carolina (Albemarle-Pamlico Sound): a tool to evaluate water quality impacts on seagrasses. ESTUARIES AND COASTS Biber PD, Gallegos CL, Kenworthy WJ Biber PD, Gallegos CL, Kenworthy WJ. Calibration of a bio-optical model in the North River, North Carolina (Albemarle-Pamlico Sound): a tool to evaluate water quality impacts on seagrasses. Estuaries and Coasts 2008;31(1):177-191. R828677 (Final)
Journal Article Experimental analysis of the response and recovery of Zostera marina (L.) and Halodule wrightii (Ascher.) to repeated light-limitation stress. JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY Biber PD, Kenworthy WJ, Paerl HW Biber PD, Kenworthy WJ, Paerl HW. Experimental analysis of the response and recovery of Zostera marina (L.) and Halodule wrightii (Ascher.) to repeated light-limitation stress. Journal of Experimental Marine Biology and Ecology 2009;369(2):110-117. R828677 (Final)
Journal Article Estimating the spatial extent of bottom-water hypoxia and habitat degradation in a shallow estuary. MARINE ECOLOGY-PROGRESS SERIES Buzzelli CP, Luettich Jr. RA, Powers SP, Peterson CH, McNinch JE, Pinckney JL, Paerl HW Buzzelli CP, Luettich Jr. RA, Powers SP, Peterson CH, McNinch JE, Pinckney JL, Paerl HW. Estimating the spatial extent of bottom-water hypoxia and habitat degradation in a shallow estuary. Marine Ecology Progress Series 2002;230:103-112. R826938 (2000)
R826938 (Final)
R827957 (Final)
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Journal Article Ferry-based monitoring of surface water quality in North Carolina estuaries. ESTUARIES Buzzelli CP, Ramus JR, Paerl HW Buzzelli CP, Ramus JR, Paerl HW. Ferry-based monitoring of surface water quality in North Carolina estuaries. Estuaries and Coasts 2003;26(4):975-984. R828677C001 (Final)
Journal Article Patterns of sedimentation in a salt marsh-dominated estuary. BIOLOGICAL BULLETIN Cavatorta JR, Johnston M, Hopkinson C, Valentine V Cavatorta JR, Johnston M, Hopkinson C, Valentine V. Patterns of sedimentation in a salt marsh-dominated estuary. Biological Bulletin 2003;205(2):239-241. R828677 (Final)
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Journal Article Ecology. Controlling eutrophication: nitrogen and phosphorus. SCIENCE Conley DJ, Paerl HW, Howarth RW, Boesch DF, Seitzinger SP, Havens KE, Lancelot C, Likens GE Conley DJ, Paerl HW, Howarth RW, Boesch DF, Seitzinger SP, Havens KE, Lancelot C, Likens GE. Ecology. Controlling eutrophication: nitrogen and phosphorus. Science 2009;323(5917):1014-1015. R828677 (Final)
Journal Article Linking ecology and economics for ecosystem management. BIOSENSOR AND CHEMICAL SENSOR TECHNOLOGY Farber S, Costanza R, Childers DL, Erikson J, Gross K, Grove M, Hopkinson CS, Kahn J, Pincetl S, Troy A, Warren P, Wilson M Farber S, Costanza R, Childers DL, Erikson J, Gross K, Grove M, Hopkinson CS, Kahn J, Pincetl S, Troy A, Warren P, Wilson M. Linking ecology and economics for ecosystem management. BioScience 2006;56(2):121-133. R828677 (Final)
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Journal Article Predicting benthic microalgal oxygen and nutrient flux responses to a nutrient reduction management strategy for the eutrophic Neuse River Estuary, North Carolina, USA. ESTUARINE, COASTAL AND SHELF SCIENCE Fear J, Gallo T, Hall N, Loftin J, Paerl H Fear J, Gallo T, Hall N, Loftin J, Paerl H. Predicting benthic microalgal oxygen and nutrient flux responses to a nutrient reduction management strategy for the eutrophic Neuse River Estuary, North Carolina, USA. Estuarine, Coastal and Shelf Science 2004;61(3):491-506. R828677C001 (2004)
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Journal Article Diagnostic tool help set water quality targets for restoring submerged aquatic vegetation in Chesapeake Bay ECOLOGICAL RESTORATION Gallegos CL, Biber PD Gallegos CL, Biber PD. Diagnostic tool help set water quality targets for restoring submerged aquatic vegetation in Chesapeake Bay. Ecological Restoration 2004;22(4):1441-1451 R828677C004 (2004)
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Journal Article Ecological thresholds: the key to successful environmental management or an important concept with no practical application? ECOSYSTEMS Groffman PM, Baron JS, Blett T, Gold AJ, Goodman I, Gunderson LH, Levinson BM, Palmer MA, Paerl HW, Peterson GD, Poff NL, Rejeski DW, Reynolds JF, Turner MG, Weathers KC, Wiens J Groffman PM, Baron JS, Blett T, Gold AJ, Goodman I, Gunderson LH, Levinson BM, Palmer MA, Paerl HW, Peterson GD, Poff NL, Rejeski DW, Reynolds JF, Turner MG, Weathers KC, Wiens J. Ecological thresholds: the key to successful environmental management or an important concept with no practical application? Ecosystems 2006;9(1):1-13. R828012 (Final)
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Journal Article Environmental factors contributing to the development and demise of a toxic dinoflagellate (Karlodinium veneficum) bloom in a shallow, eutrophic, lagoonal estuary. None Hall NS, Litaker RW, Fensin E, Adolf JE, Bowers HA, Place AR, Paerl HW Hall NS, Litaker RW, Fensin E, Adolf JE, Bowers HA, Place AR, Paerl HW. Environmental factors contributing to the development and demise of a toxic dinoflagellate (Karlodinium veneficum) bloom in a shallow, eutrophic, lagoonal estuary. Estuaries and Coasts 2008;31(2):402-418. R828677 (Final)
Journal Article Toward a predictive understanding of primary productivity in a temperate, partially stratified estuary. ESTUARINE COASTAL AND SHELF SCIENCE Harding Jr. LW, Mallonee ME, Perry ES Harding Jr. LW, Mallonee ME, Perry ES. Toward a predictive understanding of primary productivity in a temperate, partially stratified estuary. Estuarine, Coastal and Shelf Science 2002;55(3):437-463. R826941 (Final)
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Journal Article SeaWiFS retrievals of chlorophyll in Chesapeake Bay and the mid-Atlantic bight. ESTUARINE, COASTAL AND SHELF SCIENCE Harding Jr. LW, Magnuson A, Mallonee ME Harding Jr. LW, Magnuson A, Mallonee ME. SeaWiFS retrievals of chlorophyll in Chesapeake Bay and the mid-Atlantic bight. Estuarine, Coastal and Shelf Science 2005;62(1-2):75-94. R828677 (Final)
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Journal Article Trends in phosphatase activity along a successional gradient of tidal freshwater marshes on the Cooper River, South Carolina. ESTUARIES Huang XQ, Morris JT Huang X, Morris JT. Trends in phosphatase activity along a successional gradient of tidal freshwater marshes on the Cooper River, South Carolina. Estuaries 2003;26(5):1281-1290. R828677C003 (2003)
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Journal Article Drift algae-epiphyte-seagrass interactions in a subtropical Thalassia testudinum meadow. MARINE ECOLOGY-PROGRESS SERIES Irlandi EA, Orlando BA, Biber PD

Irlandi EA, Orlando BA, Biber PD. Drift algae-epiphyte-seagrass interactions in a subtropical Thalassia testudinum meadow. Marine Ecology-Progress Series 2004;279:81-91.

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Journal Article Remote sensing of biomass, leaf-area-index and chlorophyll a and b content in the ACE Basin and National Estuarine Research Reserve using sub-meter digital camera imagery. GEOCARTO INTERNATIONAL Jensen JR, Olsen G, Schill SR, Porter DE, Morris J Jensen JR, Olsen G, Schill SR, Porter DE, Morris J. Remote sensing of biomass, leaf-area-index and chlorophyll a and b content in the ACE Basin and National Estuarine Research Reserve using sub-meter digital camera imagery. Geocarto International 2002;17(3):27-36. R826944 (2000)
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Journal Article Importance of metabolism in the development of salt marsh ponds. BIOLOGICAL BULLETIN Johnston ME, Cavatorta JR, Hopkinson CS, Valentine V Johnston ME, Cavatorta JR, Hopkinson CS, Valentine V. Importance of metabolism in the development of salt marsh ponds. Biological Bulletin 2003;205(2):248-249. R828677 (Final)
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Journal Article Production of bay anchovy Anchoa mitchilli in Chesapeake Bay: application of size-based theory. MARINE ECOLOGY PROGRESS SERIES Jung S, Houde ED Jung S, Houde ED. Production of bay anchovy Anchoa mitchilli in Chesapeake Bay: application of size-based theory. Marine Ecology Progress Series 2004;281:217-232. R828677 (Final)
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Journal Article Fish biomass size spectra in Chesapeake Bay ESTUARIES Jung S, Houde ED Jung S, Houde ED. Fish biomass size spectra in Chesapeake Bay. Estuaries and Coasts 2005;28(2):226-240. R828677 (Final)
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Journal Article Eutrophication of Chesapeake Bay: historical trends and ecological interactions. MARINE ECOLOGY PROGRESS SERIES Kemp WM, Boynton WR, Adolf JE, Boesch DF, Boicourt WC, Brush G, Cornwell JC, Fisher TR, Glibert PM, Hagy JD, Harding LW, Houde ED, Kimmel DG, Miller WD, Newell RIE, Roman MR, Smith EM, Stevenson JC Kemp WM, Boynton WR, Adolf JE, Boesch DF, Boicourt WC, Brush G, Cornwell JC, Fisher TR, Glibert PM, Hagy JD, Harding LW, Houde ED, Kimmel DG, Miller WD, Newell RIE, Roman MR, Smith EM, Stevenson JC. Eutrophication of Chesapeake Bay:historical trends and ecological interactions. Marine Ecology Progress Series 2005;303:1-29. R828677 (Final)
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Journal Article Long-term trends in mesozooplankton abundance in Chesapeake Bay USA: influence of freshwater input. MARINE ECOLOGY PROGRESS SERIES Kimmel DG, Roman MR Kimmel DG, Roman MR. Long-term trends in mesozooplankton abundance in Chesapeake Bay, USA:influence of freshwater input. Marine Ecology Progress Series 2004;267:71-83. R828677 (Final)
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Journal Article Spatial and temporal variability in factors affecting mesozooplankton dynamics in Chesapeake Bay: evidence from biomass size spectra. LIMNOLOGY AND OCEANOGRAPHY Kimmel DG, Roman MR, Zhang X Kimmel DG, Roman MR, Zhang X. Spatial and temporal variability in factors affecting mesozooplankton dynamics in Chesapeake Bay:evidence from biomass size spectra. Limnology and Oceanography 2005;51(1):131-141. R828677 (Final)
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Journal Article Regional scale climate forcing of mesozooplankton dynamics in Chesapeake Bay. ESTUARIES AND COASTS Kimmel DG, Miller WD, Roman MR Kimmel DG, Miller WD, Roman MR. Regional scale climate forcing of mesozooplankton dynamics in Chesapeake Bay. Estuaries and Coasts 2006;29(3):375-387. R828677 (Final)
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Journal Article Estuarine ecosystem response captured using a synoptic climatology. None Kimmel DG, Miller WD, Harding Jr. LW, Houde ED, Roman MR Kimmel DG, Miller WD, Harding Jr. LW, Houde ED, Roman MR. Estuarine ecosystem response captured using a synoptic climatology. Estuaries and Coasts 2009;32(3):403-409. R828677 (Final)
Journal Article Zooplankton community structure, micro-zooplankton grazing impact, and seston energy content in the St. Johns River System, Florida as influenced by the toxic cyanobacterium Cylindrospermopsisraciborskii. HYDROBIOLOGIA Leonard JA, Paerl HW Leonard JA, Paerl HW. Zooplankton community structure, micro-zooplankton grazing impact, and seston energy content in the St. Johns River System, Florida as influenced by the toxic cyanobacterium Cylindrospermopsisraciborskii. Hydrobiologia 2005;537(1-3):89-97. R828677 (Final)
Journal Article Semi-diurnal seiching in a shallow, micro-tidal lagoonal estuary. CONTINENTAL SHELF RESEARCH Luettich RA, Carr SD, Reynolds-Fleming JV, Fulcher CW, McNinch JE Luettich RA, Carr SD, Reynolds-Fleming JV, Fulcher CW, McNinch JE. Semi-diurnal seiching in a shallow, micro-tidal lagoonal estuary. Continental Shelf Research 2002;22(11-13):1669-1681. R826938 (2000)
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Journal Article Measurement of water colour using AVIRIS imagery to assess the potential for an operational monitoring capability in the Pamlico Sound Estuary, USA. INTERNATIONAL JOURNAL OF REMOTE SENSING Lunetta RS, Knight JF, Paerl HW, Streicher JJ, Peierls BL, Gallo T, Lyon JG, Mace TH, Buzzelli CP Lunetta RS, Knight JF, Paerl HW, Streicher JJ, Peierls BL, Gallo T, Lyon JG, Mace TH, Buzzelli CP. Measurement of water colour using AVIRIS imagery to assess the potential for an operational monitoring capability in the Pamlico Sound Estuary, USA. International Journal of Remote Sensing 2009;30(13):3291-3314. R828677 (Final)
Journal Article Bio-optical model for Chesapeake Bay and the Middle Atlantic Bight. ESTUARINE COASTAL AND SHELF SCIENCE Magnuson A, Harding Jr. LW, Mallonee ME, Adolf JE Magnuson A, Harding Jr. LW, Mallonee ME, Adolf JE. Bio-optical model for Chesapeake Bay and the Middle Atlantic Bight. Estuarine, Coastal and Shelf Science 2004;61(3):403-424. R828677 (Final)
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Journal Article Synoptic climatology predictions of freshwater flow to Chesapeake Bay. WATER RESOURCES RESEARCH Miller WD, Kimmel DG Miller WD, Kimmel DG. Synoptic climatology predictions of freshwater flow to Chesapeake Bay. Water Resources Research (in preparation, 2004). R828677C002 (2003)
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Journal Article Synoptic-scale climatic forcing of spring phytoplankton biomass in Chesapeake Bay. ESTUARINE COASTAL AND SHELF SCIENCE Miller WD, Harding LW Miller WD, Harding LW Jr. Synoptic-scale climatic forcing of spring phytoplankton biomass in Chesapeake Bay. Estuarine, Coastal and Shelf Science (in preparation, 2004). R828677C002 (2003)
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Journal Article Predicting spring discharge of the Susquehanna River from a winter synoptic climatology for the eastern United States. None Miller WD, Kimmel DG, Harding Jr. LW Miller WD, Kimmel DG, Harding Jr. LW. Predicting spring discharge of the Susquehanna River from a winter synoptic climatology for the eastern United States. Water Resources Research 2006;42(5):W05414, doi:10.1029/2005WR004270. R828677 (Final)
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Journal Article Neural net modeling of estuarine indicators: hindcasting phytoplankton biomass and net ecosystem production in the Neuse (North Carolina) and Trout (Florida) Rivers, USA. ECOLOGICAL INDICATORS Millie DF, Weckman GR, Paerl HW, Pinckney JL, Bendis BJ, Pigg RJ, Fahnenstiel GL Millie DF, Weckman GR, Paerl HW, Pinckney JL, Bendis BJ, Pigg RJ, Fahnenstiel GL. Neural net modeling of estuarine indicators: hindcasting phytoplankton biomass and net ecosystem production in the Neuse (North Carolina) and Trout (Florida) Rivers, USA. Ecological Indicators 2006;6(3):589-608. R828677C001 (Final)
Journal Article Diversity and activity of epiphytic nitrogen-fixers on standing dead stems of the salt marsh grass Spartina alterniflora. AQUATIC MICROBIAL ECOLOGY Moisander PH, Piehler MF, Paerl HW Moisander PH, Piehler MF, Paerl HW. Diversity and activity of epiphytic nitrogen-fixers on standing dead stems of the salt marsh grass Spartina alterniflora. Aquatic Microbial Ecology 2005;39(3):271-279. R828677 (Final)
Journal Article Accuracy of LiDAR in a Salt Marsh Environment. REMOTE SENSING OF ENVIRONMENT Montane JM, Torres R

Montane JM, Torres R. Accuracy of LiDAR in a Salt Marsh Environment. Remote Sensing of the Environment (in review, 2005).

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Journal Article Accuracy assessment of Lidar saltmarsh topographic data using RTK GPS. PHOTOGRAMMETRIC ENGINEERING AND REMOTE SENSING Montane JM, Torres R Montane JM, Torres R. Accuracy assessment of Lidar saltmarsh topographic data using RTK GPS. Photogrammetric Engineering & Remote Sensing 2006;72(8):961-967. R828677 (Final)
Journal Article Responses of coastal wetlands to rising sea level. None Morris JT, Sundareshwar PV, Nietch CT, Kjerfve B, Cahoon DR Morris JT, Sundareshwar PV, Nietch CT, Kjerfve B, Cahoon DR. Responses of coastal wetlands to rising sea level. Ecology 2002;83(10):2869-2877. R826944 (2000)
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Journal Article Integrating LIDAR elevation data, multi-spectral imagery and neural network modelling for marsh characterization. INTERNATIONAL JOURNAL OF REMOTE SENSING Morris JT, Porter D, Neet M, Noble PA, Schmidt L, Lapine LA, Jensen JR Morris JT, Porter D, Neet M, Noble PA, Schmidt L, Lapine LA, Jensen JR. Integrating LIDAR elevation data, multi-spectral imagery and neural network modelling for marsh characterization. International Journal of Remote Sensing 2005;26(23):5221-5234. R828677 (Final)
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Journal Article Scale-dependent responses of coastal wetlands to rising sea level. ESTUARINE AND COASTAL MARINE SCIENCE Morris JT

Morris JT. Scale-dependent responses of coastal wetlands to rising sea level. Estuarine and Coastal Marine Science (submitted, 2005).

R828677C003 (2004)
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Journal Article Rainfall effects on marsh sediment redistribution, North Inlet, South Carolina, USA. MARINE GEOLOGY Mwamba MJ, Torres R Mwamba MJ, Torres R. Rainfall effects on marsh sediment redistribution, North Inlet, SC. Marine Geology 2002;189(3-4):267-287. R828677C003 (2002)
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Journal Article Rationale for a new generation of indicators for coastal waters. ENVIRONMENTAL HEALTH PERSPECTIVES Niemi G, Wardrop D, Brooks R, Anderson S, Brady V, Paerl H , Rakocinski C, Brouwer M, Levinson B, McDonald M Niemi G, Wardrop D, Brooks R, Anderson S, Brady V, Paerl H , Rakocinski C, Brouwer M, Levinson B, McDonald M. Rationale for a new generation of indicators for coastal waters. Environmental Health Perspectives 2004;112(9):979-986. R828675 (2004)
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Journal Article Contrasting patterns of phytoplankton community pigment composition in two salt marsh estuaries in southeastern United States. APPLIED AND ENVIRONMENTAL MICROBIOLOGY Noble PA, Tymowski RG, Fletcher M, Morris JT, Lewitus AJ Noble PA, Tymowski RG, Fletcher M, Morris JT, Lewitus AJ. Contrasting patterns of phytoplankton community pigment composition in two salt marsh estuaries in southeastern United States. Applied and Environmental Microbiology 2003;69(7):4129-4143. R826944 (2000)
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Journal Article Geomorphic analysis of tidal creek networks. WATER RESOURCES RESEARCH Novakowski KI, Torres R, Gardner LR, Voulgaris G Novakowski KI, Torres R, Gardner LR. Geomorphic analysis of tidal creek networks. Water Resources Research 2004;40(5):W05401. R828677 (Final)
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Journal Article Connecting atmospheric nitrogen deposition to coastal eutrophication. ENVIRONMENTAL SCIENCE & TECHNOLOGY Paerl HW Paerl HW. Connecting atmospheric nitrogen deposition to coastal eutrophication. Environmental Science & Technology 2002;36(15):323A-326A. R826938 (Final)
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Journal Article Atmospheric deposition of nitrogen: Implications for nutrient over-enrichment of coastal waters. ESTUARIES Paerl HW, Dennis RL, Whitall DR Paerl HW, Dennis RL, Whitall DR. Atmospheric deposition of nitrogen: implications for nutrient over-enrichment of coastal waters. Estuaries and Coasts 2002;25(4):677-693. R826938 (2001)
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Journal Article Characterizing man-made and natural modifications of microbial diversity and activity in coastal ecosystems. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY Paerl HW, Dyble J, Twomey L, Pinckney JL, Nelson J, Kerkhof L Paerl HW, Dyble J, Twomey L, Pinckney JL, Nelson J, Kerkhof L. Characterizing man-made and natural modifications of microbial diversity and activity in coastal ecosystems. Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology 2002;81(1-4):487-507. R828677 (2001)
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Journal Article Microbial indicators of aquatic ecosystem change: current applications to eutrophication studies. FEMS MICROBIOLOGY ECOLOGY Paerl HW, Dyble J, Moisander PH, Noble RT, Piehler MF, Pinckney JL, Steppe TF, Twomey LJ, Valdes LM Paerl HW, Dyble J, Moisander PH, Noble RT, Piehler MF, Pinckney JL, Steppe TF, Twomey LJ, Valdes LM. Microbial indicators of aquatic ecosystem change: current applications to eutrophication studies. FEMS Microbiology Ecology 2003;46(3):233-246. R828677C001 (Final)
Journal Article Hypersaline cyanobacterial mats as indicators of elevated tropical hurricane activity and associated climate change. AMBIO Paerl HW, Steppe TF, Buchan KC, Potts M Paerl HW, Steppe TF, Buchan KC, Potts M. Hypersaline cyanobacterial mats as indicators of elevated tropical hurricane activity and associated climate change. Ambio 2003;32(2):87-90. R828677C001 (Final)
Journal Article Scaling up: the next challenge in environmental microbiology. ENVIRONMENTAL MICROBIOLOGY Paerl HW, Steppe TF Paerl HW, Steppe TF. Scaling up: the next challenge in environmental microbiology. Environmental Microbiology 2003;5(11):1025-1038. R828677C001 (Final)
Journal Article Phytoplankton photopigments as indicators of estuarine and coastal eutrophication. BIOSCIENCE Paerl HW, Valdes LM, Pinckney JL, Piehler MF, Dyble J, Moisander PH Paerl HW, Valdes LM, Pinckney JL, Piehler MF, Dyble J, Moisander PH. Phytoplankton photopigments as indicators of estuarine and coastal eutrophication. BioScience 2003;53(10):953-964. R828677C001 (Final)
Journal Article Solving problems resulting from solutions: Evolution of a dual nutrient management strategy for the eutrophying Neuse River Estuary, North Carolina. ENVIRONMENTAL SCIENCE & TECHNOLOGY Paerl HW, Valdes LM, Joyner AB, Piehler MF

Paerl HW, Valdes LM, Joyner AB, Piehler MF. Solving problems resulting from solutions: Evolution of a dual nutrient management strategy for the eutrophying Neuse River Estuary, North Carolina. Environmental Science & Technology 2004;38(11):3068-3073.

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Journal Article Ecological response to hurricane events in the Pamlico Sound system, North Carolina, and implications for assessment and management in a regime of increased frequency. ESTUARIES AND COASTS Paerl HW, Valdes LM, Joyner AR, Peierls BL, Piehler MF, Riggs SR, Christian RR, Eby LA, Crowder LB, Ramus JS, Clesceri EJ, Buzzelli CP, Luettich RA Paerl HW, Valdes LM, Joyner AR, Peierls BL, Piehler MF, Riggs SR, Christian RR, Eby LA, Crowder LB, Ramus JS, Clesceri EJ, Buzzelli CP, Luettich RA. Ecological response to hurricane events in the Pamlico Sound system, North Carolina, and implications for assessment and management in a regime of increased frequency. Estuaries and Coasts 2006;29(6):1033-1045. R828677 (Final)
Journal Article Anthropogenic and climatic influences on the eutrophication of large estuarine ecosystems. LIMNOLOGY AND OCEANOGRAPHY Paerl HW, Valdes LM, Peierls BL, Adolf JE, Harding Jr LW Paerl HW, Valdes LM, Peierls BL, Adolf JE, Harding Jr LW. Anthropogenic and climatic influences on the eutrophication of large estuarine ecosystems. Limnology and Oceanography 2006;51(1, Part 2):448-462. R828677C001 (Final)
Journal Article Assessing and managing nutrient-enhanced eutrophication in estuarine and coastal waters: interactive effects of human and climatic perturbations. ECOLOGICAL ENGINEERING Paerl HW Paerl HW. Assessing and managing nutrient-enhanced eutrophication in estuarine and coastal waters: interactive effects of human and climatic perturbations. Ecological Engineering 2006;26(1):40-54. R828677C001 (Final)
Journal Article Assessing the effects of nutrient management in an estuary experiencing climatic change: the Neuse River Estuary, North Carolina. ENVIRONMENTAL MANAGEMENT Paerl HW, Valdes LM, Piehler MF, Stow CA Paerl HW, Valdes LM, Piehler MF, Stow CA. Assessing the effects of nutrient management in an estuary experiencing climatic change: the Neuse River Estuary, North Carolina. Environmental Management 2006;37(3):422-436. R828677C001 (Final)
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Journal Article Phytoplankton indicators of ecological change in the eutrophying Pamlico Sound system, North Carolina. ECOLOGICAL APPLICATIONS Paerl HW, Valdes-Weaver LM, Joyner AR, Winkelmann V Paerl HW, Valdes-Weaver LM, Joyner AR, Winkelmann V. Phytoplankton indicators of ecological change in the eutrophying Pamlico Sound system, North Carolina. Ecological Applications 2007;17(Suppl 5):S88-S101. R828677 (Final)
Journal Article Controlling eutrophication along the freshwater-marine continuum: dual nutrient (N and P) reductions are essential. ESTUARIES AND COASTS Paerl HW Paerl HW. Controlling eutrophication along the freshwater-marine continuum: dual nutrient (N and P) reductions are essential. Estuaries and Coasts 2009;32(4):593-601. R828677 (Final)
Journal Article FerryMon: ferry-based monitoring and assessment of human and climatically driven environmental change in the Albemarle-Pamlico Sound system. ENVIRONMENTAL SCIENCE & TECHNOLOGY Paerl HW, Rossignol KL, Guajardo R, Hall NS, Joyner AR, Peierls BL, Ramus JS Paerl HW, Rossignol KL, Guajardo R, Hall NS, Joyner AR, Peierls BL, Ramus JS. FerryMon: ferry-based monitoring and assessment of human and climatically driven environmental change in the Albemarle-Pamlico Sound system. Environmental Science & Technology 2009;43(20):7609-7613. R828677 (Final)
Journal Article Phytoplankton community indicators of short- and long-term ecological change in the anthropogenically and climatically impacted Neuse River Estuary, North Carolina, USA. ESTUARIES AND COASTS Paerl HW, Rossignol KL, Hall SN, Peierls BL, Wetz MS Paerl HW, Rossignol KL, Hall SN, Peierls BL, Wetz MS. Phytoplankton community indicators of short-and long-term ecological change in the anthropogenically and climatically impacted Neuse River Estuary, North Carolina, USA. Estuaries and Coasts 2010;33(2):485-497. R828677 (Final)
Journal Article Determining anthropogenic and climatically-induced change in aquatic ecosystems using microbial indicators: an integrative approach. VERHANDLUNGEN INTERNATIONALE VEREINIGUNG FUR THEORESTISCHE AND ANGEWANDTE LIMNOLOGIE Pearl HW, Piehler MF, Valdes LM, Dyble J, Moisander PH, Pinckney JL, Steppe TF Paerl HW, Piehler MF, Valdes LM, Dyble J, Moisander PH, Pinckney JL, Steppe TF. Determining anthropogenic and climatically-induced change in aquatic ecosystems using microbial indicators: an integrative approach. Verhandlungen Internationale Vereinigung fur Theoretische und Angewandte Limnologie 2005;29(1):89-133. R828677C001 (Final)
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Journal Article Water quality and phytoplankton as indicators of hurricane impacts on a large estuarine ecosystem. ESTUARIES Peierls BL, Christian RR, Paerl HW Peierls BL, Christian RR, Paerl HW. Water quality and phytoplankton as indicators of hurricane impacts on a large estuarine ecosystem. Estuaries and Coasts 2003;26(5):1329-1343. R828677C001 (Final)
Journal Article Effects of modified nutrient concentrations and ratios on the structure and function of the native phytoplankton community in the Neuse River Estuary, North Carolina, USA. AQUATIC ECOLOGY Piehler MF, Dyble J, Moisander PH, Pinckney JL, Paerl HW Piehler MF, Dyble J, Moisander PH, Pinckney JL, Paerl HW. Effects of modified nutrient concentrations and ratios on the structure and function of the native phytoplankton community in the Neuse River Estuary, North Carolina, USA. Aquatic Ecology 2002;36(3):371-385. R826938 (Final)
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Journal Article Impacts of inorganic nutrient enrichment on phytoplankton community structure and function in Pamlico Sound, NC, USA. ESTUARINE, COASTAL AND SHELF SCIENCE Piehler MF, Twomey LJ, Hall NS, Paerl HW Piehler MF, Twomey LJ, Hall NS, Paerl HW. Impacts of inorganic nutrient enrichment on phytoplankton community structure and function in Pamlico Sound, NC, USA. Estuarine, Coastal and Shelf Science 2004;61(2):197-209. R828677C001 (2003)
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Journal Article Interactions between nitrogen dynamics and the phytoplankton community in Lake George, Florida, USA. LAKE AND RESERVOIR MANAGEMENT Piehler MF, Dyble J, Moisander PH, Chapman AD, Hendrickson J, Paerl HW Piehler MF, Dyble J, Moisander PH, Chapman AD, Hendrickson J, Paerl HW. Interactions between nitrogen dynamics and the phytoplankton community in Lake George, Florida, USA. Lake and Reservoir Management 2009;25(1):1-14. R828677 (Final)
Journal Article Application of photopigment biomarkers for quantifying microalgal community composition and in situ growth rates. ORGANIC GEOCHEMISTRY Pinckney JL, Richardson TL, Millie DF, Paerl HW Pinckney JL, Richardson TL, Millie DF, Paerl HW. Application of photopigment biomarkers for quantifying microalgal community composition and in situ growth rates. Organic Geochemistry 2001;32(4):585-595. R826938 (Final)
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Journal Article Portable autonomous vertical profiler for estuarine applications. ESTUARIES Reynolds-Fleming JV, Fleming JG, Luettich RA Reynolds-Fleming JV, Fleming JG, Luettich RA. Portable autonomous vertical profiler for estuarine applications. Estuaries and Coasts 2002;25(1):142-147. R826938 (Final)
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Journal Article Wind-driven lateral variability in a partially mixed estuary. ESTUARINE COASTAL AND SHELF SCIENCE Reynolds-Fleming JV, Luettich Jr. RA Reynolds-Fleming JV, Luettich Jr. RA. Wind-driven lateral variability in a partially mixed estuary. Estuarine, Coastal and Shelf Science 2004;60(3):395-407. R826938 (Final)
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Journal Article Simulation of lateral salinity variability in a shallow, wind-driven estuary affected by fish kills. OCEAN DYNAMICS Reynolds-Fleming JV, Luettich RA Reynolds-Fleming JV, Luettich RA. Simulation of lateral salinity variability in a shallow, wind-driven estuary affected by fish kills. Ocean Dynamics (in preparation, 2004). R828677C001 (2003)
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Journal Article Stimulation of plankton and fish abundance in Chesapeake Bay by Hurricane Isabel. EOS, TRANSACTIONS, AMERICAN GEOPHYSICAL UNION Roman MR, Boicourt WC, Kimmel DG, Miller WD, Adolf JE, Bichy J, Harding Jr. LW, Houde ED, Jung S, Zhang JX Roman MR, Boicourt WC, Kimmel DG, Miller WD, Adolf JE, Bichy J, Harding Jr. LW, Houde ED, Jung S, Zhang JX. Stimulation of plankton and fish abundance in Chesapeake Bay by Hurricane Isabel. Eos, Transactions American Geophysical Union 2005;86(28):261-265. R828677 (Final)
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Journal Article Phosphorus limitation of coastal ecosystem processes. SCIENCE Sundareshwar PV, Morris JT, Koepfler EK, Fornwalt B Sundareshwar PV, Morris JT, Koepfler EK, Fornwalt B. Phosphorus limitation of coastal ecosystem processes. Science 2003;299(5606):563-565. R828677C003 (2003)
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Journal Article Properties of intertidal marsh sediment mobilized by rainfall. LIMNOLOGY AND OCEANOGRAPHY Torres R, Mwamba MJ, Goni MA Torres R, Mwamba MJ, Goni MA. Properties of marsh sediment mobilized by low tide rainfall. Limnology and Oceanography 2003;48(3):1245-1253. R828677C003 (2002)
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Journal Article Effects of Salt Marsh topography on tidal asymmetry ESTUARINE COASTAL AND SHELF SCIENCE Torres R, Styles R

Torres R, Styles R. Effects of Salt Marsh topography on tidal asymmetry. Estuarine Coastal and Shelf Science (in review, 2005).

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Journal Article Bio-optics of Chesapeake Bay from measurements and radiative transfer closure. ESTUARINE, COASTAL AND SHELF SCIENCE Tzortziou M, Herman JR, Gallegos CL, Neale PJ, Subramaniam A, Harding Jr. LW, Ahmad Z Tzortziou M, Herman JR, Gallegos CL, Neale PJ, Subramaniam A, Harding Jr. LW, Ahmad Z. Bio-optics of Chesapeake Bay from measurements and radiative transfer closure. Estuarine, Coastal and Shelf Science 2006;68(1-2):348-362. R828677 (Final)
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Journal Article Light absorption by phytoplankton and chromophoric dissolved organic matter in the drainage basin and estuary of the Neuse River, North Carolina (USA). FRESHWATER BIOLOGY Vahatalo AV, Wetzel RG, Paerl HW Vahatalo AV, Wetzel RG, Paerl HW. Light absorption by phytoplankton and chromophoric dissolved organic matter in the drainage basin and estuary of the Neuse River, North Carolina (U.S.A.). Freshwater Biology 2005;50(3):477-493. R828677C001 (Final)
Journal Article Long-term temporal and spatial trends in phytoplankton biomass and class-level taxonomic composition in the hydrologically variable Neuse-Pamlico estuarine continuum, North Carolina, USA. LIMNOLOGY AND OCEANOGRAPHY Valdes-Weaver LM, Piehler MF, Pinckney JL, Howe KE, Rossignol K, Paerl HW Valdes-Weaver LM, Piehler MF, Pinckney JL, Howe KE, Rossignol K, Paerl HW. Long-term temporal and spatial trends in phytoplankton biomass and class-level taxonomic composition in the hydrologically variable Neuse-Pamlico estuarine continuum, North Carolina, USA. Limnology and Oceanography 2006;51(3):1410-1420. R828677C001 (Final)
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Journal Article Investigating drainage density and fractal dimension as geomorphometric indicators of tidal marsh condition using remotely sensed data and geographical information systems. INTERNATIONAL JOURNAL OF REMOTE SENSING Valentine V, Hopkinson C Valentine V, Hopkinson, Jr. C. Investigating drainage density and fractal dimension as geomorphometric indicators of tidal marsh condition using remotely sensed data and geographical information systems. International Journal of Remote Sensing (in submission, 2004). R828677C003 (2003)
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Journal Article Formation of ponds in marshes of the Plum Island Sound estuary. ESTUARINE COASTAL AND SHELF SCIENCE Valentine V, Hopkinson Jr. CS, Millette TL, Hayward CD, et al

Valentine V, Hopkinson Jr. CS, Millette TL, Hayward CD, et al. Formation of ponds in marshes of the Plum Island Sound estuary. Estuarine, Coastal and Shelf Science (submitted, 2005).

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Journal Article Estuarine phytoplankton responses to hurricanes and tropical storms with different characteristics (trajectory, rainfall, winds). ESTUARIES AND COASTS Wetz MS, Paerl HW Wetz MS, Paerl HW. Estuarine phytoplankton responses to hurricanes and tropical storms with different characteristics (trajectory, rainfall, winds). Estuaries and Coasts 2008;31(2):419-429. R828677 (Final)
Journal Article Measurements of Reynolds stress in a wind driven lagoonal estuary. OCEAN DYNAMICS Whipple AC, Luettich RA, Seim HE Whipple AC, Luettich RA, Seim HE. Measurements of Reynolds stress in a wind-driven lagoonal estuary. Ocean Dynamics 2006;56(3-4):169-185. R828677C001 (Final)
Journal Article Phytoplankton production, biomass and community structure following a summer nutrient pulse in Chesapeake Bay. AQUATIC ECOLOGY Yeager CLJ, Harding Jr. LW, Mallonee ME Yeager CLJ, Harding Jr. LW, Mallonee ME. Phytoplankton production, biomass and community structure following a summer nutrient pulse in Chesapeake Bay. Aquatic Ecology 2005;39(2):135-149. R828677 (Final)
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Report Salt marshes and sealevel rise: sediment dispersal in the Plum Island Sound marsh ecosystem. None Franklin J Franklin J. Salt marshes and sealevel rise: sediment dispersal in the Plum Island Sound marsh ecosystem. Final Semester Research Project Report, 2002, 41 pp. R828677C003 (2002)
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Report Impacts of atmospheric pollutant on aquatic ecosystems. None Swackhamer DL, Paerl HW, Eisenreich SJ, Hurley J, Hornbuckle KC, McLachlan M, Mount D, Muir D, Schindler D Swackhamer DL, Paerl HW, Eisenreich SJ, Hurley J, Hornbuckle KC, McLachlan M, Mount D, Muir D, Schindler D. Impacts of atmospheric pollutant on aquatic ecosystems. Issues in Ecology No. 12, Summer 2004, pp. 2-23. R828677C001 (Final)