Science Inventory

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Biales, A., Greg Toth, J. Martinson, W. Huang, D. Bencic, R. Flick, Mary Jean See, D. Gordon, AND M. Kostich. An overview of the updated and annotated fathead minnow genome. SETAC North America, Toronto, ON, CANADA, November 03 - 07, 2019.

Huang, W., D. Bencic, R. Flick, D. Nacci, B. Clark, L. Burkhard, T. Lahren, AND A. Biales. Characterization of the Fundulus heteroclitus embryo transcriptional response and development of a gene expression-based fingerprint of exposure for the alternative flame retardant, TBPH (bis (2-ethylhexyl)-tetrabromophthalate). ENVIRONMENTAL POLLUTION. Elsevier Science Ltd, New York, NY, 247:696-705, (2019). https://doi.org/10.1016/j.envpol.2019.01.010

Kostich, M., D. Bencic, R. Flick, J. Martinson, W. Huang, Greg Toth, AND A. Biales. Comparing microarrays to RNA-seq for transcriptomic analysis of whole fathead minnow larvae. SETAC North America, Toronto, ON, CANADA, November 03 - 07, 2019.

Fetke, J., R. Flick, J. Martinson, W. Huang, Mary Jean See, E. Pilgrim, AND A. Biales. DNA Methylation Profile of Estrogen Receptor Alpha in Fish Exposed to EE2. SETAC North America, Toronto, ON, CANADA, November 03 - 07, 2019.

Flick, R., D. Bencic, M. Kostich, AND A. Biales. Determination of an optimal age and duration of exposure of larval fathead minnows for gene expression-based studies. SETAC North America, Toronto, ON, CANADA, November 03 - 07, 2019.

Martinson, J., W. Huang, G. Toth, D. Bencic, R. Flick, D. Lattier, A. Biales, AND M. Kostich. Development and Annotation of Protein Coding Gene Models for the Fathead Minnow Genome. 2019 SETAC North America Annual Meeting, Toronto, CANADA, November 03 - 07, 2019.

Martinson, J., D. Bencic, R. Flick, M. Kostich, W. Huang, D. Lattier, AND A. Biales. Development of Classifiers of Exposure Employing Fathead minnow, including Evaluation of an Alternative, Lower Cost, RNA-seq Library Preparation Method. 2019 SETAC North America Annual Meeting, Toronto, CANADA, November 03 - 07, 2019.

Biales, A., K. Flynn, AND D. Villeneuve. Development of High-Throughput Transcriptomic Points Of Departure (HTTr-POD) for ecological species. Accelerating the Pace of Chemical Risk Assessment), Researach triangle Park, NC, October 09 - 10, 2019.

Toth, G., D. Bencic, R. Flick, W. Huang, AND A. Biales. Differential expression of coding and non-coding RNAs in propranolol-exposed fathead minnow larvae. 2019 SETAC North America Annual Meeting, Toronto, CANADA, November 03 - 07, 2019.

Huang, W., D. Bencic, R. Flick, J. Fetke, AND A. Biales. Genome-wide identification of epigenetic changes associated with 17α-ethynylestradiol (EE2) exposure in the fathead minnows. 2019 American Society of Human Genetics (ASHG) Annual Meeting, Houston, TX, October 15 - 19, 2019.

Biales, A., D. Bencic, R. Flick, D. Gordon, AND W. Huang. Global transcriptomic profiling of microcystin-LR or -RR treated hepatocytes (HepaRG). SETAC North America, Toronto, ON, CANADA, November 03 - 07, 2019.

Kostich, M., D. Bencic, A. Batt, MaryJean See, R. Flick, D. Gordon, Jim Lazorchak, AND A. Biales. Multigene Biomarkers of Pyrethroid Exposure: Exploratory Experiments. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY. Society of Environmental Toxicology and Chemistry, Pensacola, FL, 38(11):2436-2466, (2019). https://doi.org/10.1002/etc.4552

Biales, A. Omics for environmental scientists, engineers, and regulators: An introduction. SETAC North America, Toronto, ON, CANADA, November 03 - 07, 2019.

Nacci, D., B. Clark, M. LaGuardia, K. Miller, D. Champlin, I. Kirby, A. Bertrand, Saro Jayaraman, W. Huang, AND A. Biales. Bioaccumulation and Effects of the Alternative Flame Retardant, Bis(2-ethylhexyl) tetrabromophthalate (TBPH), in Atlantic killifish, Fundulus heteroclitus. Society of Toxicology (SOT) 57th Annual Meeting and ToxExpo, San Antonio, TX, March 11 - 15, 2018.

Wilson, V., A. Biales, J. Simmons, Dan Villeneuve, C. Impellitteri, AND M. Latham. Bioassays for Evaluating Water Quality: Screening for total bioactivity to assess water safety. U.S. Environmental Protection Agency, Office of Research and Development, National Center for Environmental Assessment, Washington, DC, EPA/600/F-18/048, 2018.

Toth, Greg, D. Lattier, D. Bencic, M. Kostich, R. Flick, AND A. Biales. Differential Expression of microRNAs in Fathead Minnow Larvae Exposed to Ethinyl Estradiol. 2018 SETAC NA Annual Meeting, Sacramento, California, November 04 - 08, 2018.

Huang, W., D. Bencic, R. Flick, AND A. Biales. Genome-wide Assessment of CpG-methylation Changes in Male Fathead Minnows after Exposure to 17α-ethynylestradiol (EE2). 2018 SETAC North America Meeting, Sacramento, CA, November 04 - 08, 2018.

Campos, B., J. Colbourne, James Brown, M. Viant, A. Biales, K. Gallagher, T. Henry, K. Sappington, S. Marshall, AND G. Whale. How omics technologies can enhance chemical safety regulation: perspectives from academia, government, and industry. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY. Society of Environmental Toxicology and Chemistry, Pensacola, FL, 37(5):1252-1259, (2018). https://doi.org/10.1002/etc.4079

Lazorchak, Jim, T. Norberg-King, A. Biales, V. Wilson, L. Phillips, AND J. Clark. Overview of existing and next generation whole effluent toxicity testing methods for assessing wastewater toxicity. XENOWAC II, Limasol, CYPRUS, October 10 - 12, 2018.

Poynton, H., S. Hasenbein, J. Benoit, M. Sepulveda, M. Poelchau, D. Hughes, S. Murali, S. Chen, K. Glastad, M. Goodisman, M. Friedrich, J. Jones, H. Robertson, R. Feyereisen, A. Mechler-Hickson, N. Mathers, C. Lee, J. Colbourne, A. Biales, J. Johnston, G. Wellborn, A. Rosendale, A. Cridge, M. Munoz-Torres, P. Bain, A. Manny, K. Major, F. Lambert, C. Vulpe, P. Tuck, B. Blalock, Y. Lin, J. Werren, M. Smith, H. Ochoa-Acuna, M. May Chen, C. Childers, J. Qu, S. Dugan, S. Lee, H. Chao, H. Dinh, Y. Han, H. Dossapaneni, K. Worley, D. Muzny, R. Gibbs, AND S. Richards. The Toxicogenome of Hyalella azteca: A Model for Sediment Ecotoxicology and Evolutionary Toxicology. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, 52(10):6009–6022, (2018). https://doi.org/10.1021/acs.est.8b00837

Feswick, A., M. Isaacs, A. Biales, R. Flick, D. Bencic, R. Wang, C. Vulpe, M. Brown-Augustine, A. Loguinov, F. Falciani, P. Antczak, J. Herbert, L. Brown, N. Denslow, K. Kroll, C. Lavelle, V. Dang, L. Escalon, N. Garcia-Reyero, C. Martyniuk, AND K. Munkittrick. How consistent are we? Interlaboratory comparison study in fathead minnows using the model estrogen 17α‐ethinylestradiol to develop recommendations for environmental transcriptomics. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY. Society of Environmental Toxicology and Chemistry, Pensacola, FL, 36(10):2614-2623, (2017). https://doi.org/10.1002/etc.3799

Brander, S., A. Biales, AND R. Connon. The Role of Epigenomics in Aquatic Toxicology. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY. Society of Environmental Toxicology and Chemistry, Pensacola, FL, 36(10):2565–2573, (2017).

Jastrow, A., D. Gordon, K. Auger, E. Punska, K. Arcaro, K. Keteles, D. Winkleman, D. Lattier, A. Biales, AND Jim Lazorchak. Tools to minimize interlaboratory variability in vitellogenin gene expression monitoring programs. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY. Society of Environmental Toxicology and Chemistry, Pensacola, FL, 36(11):3102-3107, (2017). https://doi.org/10.1002/etc.3885

Wang, R., A. Biales, N. Garcia-Reyero, E. Perkins, Dan Villeneuve, G. Ankley, AND D. Bencic. Fish Connectivity Mapping: Linking Chemical Stressors by Their MOA-Driven Transcriptomic Profiles. BMC Genomics. BioMed Central Ltd, London, Uk, 17:84, (2016). https://doi.org/10.1186/s12864-016-2406-y

Feswick, A., M. Isaacs, A. Biales, R. Flick, D. Bencic, R. Wang, B. Lorraine, M. Brown-Augustine, AND A. Loguinov. How consistent are we? Inter-laboratory comparison for male fathead minnows exposed to 17α-ethinylestradiol. Society of Toxicology and Chemistry, Orlando, FL, November 06 - 10, 2016.