Grantee Research Project Results
Selected Publications Details for Grant Number R834998
Model of Toxicant Response in Engineered Liver
RFA:
Computational Toxicology: Biologically-Based Multi-Scale Modeling (2010)
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Reference Type | Reference Title | Journal | Author | Citation | Progress Report Year | Document Sources |
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Book Chapter | Polyelectrolyte multilayers for applications in hepatic tissue engineering. | None | Cassin ME, Rajagopalan P | Cassin ME, Rajagopalan P. Polyelectrolyte multilayers for applications in hepatic tissue engineering. In: Picart C, Caruso F, Voegl J-C, eds. Layer-by-Layer Films for Biomedical Applications. Weinheim, Germany: Wiley-VCH Verlag GmbH & Co., 2015, Chapter 22, pp. 487-506. |
R834998 (2013) |
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Journal Article | GraphSpace: stimulating interdisciplinary collaborations in network biology | BIOINFORMATICS | Bharadwaj A, Singh D, Ritz A, Tegge A, Poirel C, Kraivkivski P, Adames N, Luther K, Kale S, Peccoud J, Tyson T, Murali T | Bharadwaj A, Singh D, Ritz A, Tegge A, Poirel C, Kraivkivski P, Adames N, Luther K, Kale S, Peccoud J, Tyson T, Murali T. GraphSpace: stimulating interdisciplinary collaborations in network biology. BIOINFORMATICS 2017;33(19):3134-3436 |
R834998 (2013) |
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Journal Article | Designing a multicellular organotypic 3D liver model with a detachable, nanoscale polymeric space of Disse. | TISSUE ENGINEERING PART C: METHODS | Larkin AL, Rodrigues RR, Murali TM, Rajagopalan P | Larkin AL, Rodrigues RR, Murali TM, Rajagopalan P. Designing a multicellular organotypic 3D liver model with a detachable, nanoscale polymeric Space of Disse. Tissue Engineering Part C: Methods 2013;19(11):875-884. |
R834998 (2013) |
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Journal Article | Summarizing cellular responses as biological process networks | BMC SYSTEMS BIOLOGY | Lasher CD, Rajagopalan P, Murali TM | Lasher CD, Rajagopalan P, Murali TM. Summarizing cellular responses as biological process networks. BMC Systems Biology 2013;7:68. |
R834998 (2013) |
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Journal Article | Systems biology characterization of engineered tissues. | ANNUAL REVIEW OF BIOMEDICAL ENGINEERING | Rajagopalan P, Kasif S, Murali TM | Rajagopalan P, Kasif S, Murali TM. Systems biology characterization of engineered tissues. Annual Review of Biomedical Engineering 2013;15:55-70. |
R834998 (2013) |
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Journal Article | Pathways on demand: automated reconstruction of human signaling networks | SYSTEMS BIOLOGY AND APPLICATIONS | Rita A, Poirel C, Tegge A, Sharp N, Simmons K, Powell A, Kale S, Murali T | Rita A, Poirel C, Tegge A, Sharp N, Simmons K, Powell A, Kale S, Murali T. Pathways on demand: automated reconstruction of human signaling networks. SYSTEMS BIOLOGY AND APPLICATIONS 2016;2(16002) |
R834998 (2013) |
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Journal Article | XTalkDB: a database of signaling pathway crosstalk. | NUCLEIC ACIDS RESEARCH | Sam SA, Teel J, Tegge AN, Bharadwaj A, Murali TM | Sam SA, Teel J, Tegge AN, Bharadwaj A, Murali TM. XTalkDB: a database of signaling pathway crosstalk. Nucleic Acids Research 2017;45(D1):D432-D439. |
R834998 (2013) |
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Journal Article | XTALK: a path-based approach to identifying crosstalk between signaling pathways. | BIOINFORMATICS | Tegge AN, Sharp N, Murali TM | Tegge AN, Sharp N, Murali TM. XTALK: a path-based approach for identifying crosstalk between signaling pathways. Bioinformatics 2016;32(2):242-251. |
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Journal Article | Transcriptomic Analysis of Hepatic Cells in Multicellular Organotypic Liver Models | NATURE | Tegge A, Rodrigues R, Larkin A, Murali T, Pagagopalan P | Tegge A, Rodrigues R, Larkin A, Murali T, Pagagopalan P. Transcriptomic Analysis of Hepatic Cells in Multicellular Organotypic Liver Models. NATURE 2018;8(11306) |
R834998 (2013) |
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Journal Article | The promise of organotypic hepatic and gastrointestinal models. | TRENDS IN BIOTECHNOLOGY | Vu LT, Less RR, Rajagopalan P | Vu LT, Less RR, Rajagopalan P. The promise of organotypic hepatic and gastrointestinal models. Trends in Biotechnology 2014;32(8):406-413. |
R834998 (2013) |
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Journal Article | The hepatocyte proteome in organotypic rat liver models and the influence of the local microenvironment | PROTEOME SCIENCE | Vu L, Orbach S, Ray W, Cassin ME, Rajagopalan P, Helm R | Vu L, Orbach S, Ray W, Cassin ME, Rajagopalan P, Helm R. The hepatocyte proteome in organotypic rat liver models and the influence of the local microenvironment. PROTEOME SCIENCE 2017;15(12) |
R834998 (2013) |
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