Grantee Research Project Results
Publications Details for Grant Number R828039
Detection of Emerging Microbial Contaminants in Source and Finished Drinking Water with DNA Microarrays
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| Reference Type | Citation | Progress Report Year | Document Sources |
|---|---|---|---|
| Book Chapter | Skaggs R, Straub T, Wright B, Bruckner-Lea C, Harvey S. Development of the next generation microbiological and chemical detection capabilities for water supplies. In: Mays LW, ed. Water Supply Systems Security. New York, NY:McGraw-Hill, 2004, pp. 18.1-18.19. |
R828039 (Final) |
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| Journal Article | Kingsley MT, Straub TM, Call DR, Daly DS, Wunschel SC, Chandler DP. Fingerprinting closely related Xanthomonas pathovars with random nonamer oligonucleotide microarrays. Applied and Environmental Microbiology 2002;68(12):6361-6370. |
R828039 (Final) |
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| Journal Article | Small J, Call DR, Brockman FJ, Straub TM, Chandler DP. Direct detection of 16S rRNA in soil extracts by using oligonucleotide microarrays. Applied and Environmental Microbiology 2001;67(10):4708-4716. |
R828039 (Final) |
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| Journal Article | Straub TM, Daly DS, Wunshel S, Rochelle PA, DeLeon R, Chandler DP. Genotyping Cryptosporidium parvum with an hsp70 single-nucleotide polymorphism microarray. Applied and Environmental Microbiology 2002;68(4):1817-1826. |
R828039 (2002) R828039 (Final) |
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| Journal Article | Straub TM, Chandler DP. Towards a unified system for detecting waterborne pathogens. Journal of Microbiological Methods 2003;53(2):185-197. |
R828039 (2002) R828039 (Final) |
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| Journal Article | Straub TM, Quinonez-Diaz MD, Valdez CO, Call DR, Chandler DP. Using DNA microarrays to detect multiple pathogen threats in water. Water Supply 2004;4(2):107-114. |
R828039 (Final) |
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| Journal Article | Straub TM, Dockendorff BP, Quinonez-Diaz MD, Valdez CO, Shutthanandan JI, Tarasevich BJ, Grate JW, Bruckner-Lea CJ. Automated methods for multiplexed pathogen detection. Journal of Microbiological Methods 2005;62(3):303-316. |
R828039 (Final) |
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| Journal Article | Willse A, Straub TM, Wunschel SC, Small JA, Call DR, Daly DS, Chandler DP. Quantitative oligonucleotide microarray fingerprinting of Salmonella enterica isolates. Nucleic Acids Research 2004;32(5):1848-1856. |
R828039 (Final) |
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| Presentation | Bruckner-Lea CJ, Dockendorff BP, Valdez CO, Shutthanandan JI, Quinonez-Diaz MD, Tarasevich BJ, Grate JW, Straub TM. BEADS: an automated system for multiplexed pathogen detection using nucleic acid analysis. Presented at the Second Joint Conference on Point Detection for Chemical and Biological Defense, Williamsburg, VA, March 2, 2004. |
R828039 (Final) |
not available |
| Presentation | Dockendorff BP, Tarasevich BJ, Shutthanandan JI, Grate JW, Valdez CO, Bruckner-Lea CJ, Straub TM. Pathogen detection by mRNA analysis: automated RNA purification and microarray detection. Presented at the American Society for Microbiology Biodefense Conference, Baltimore, MD, March 8, 2004. |
R828039 (Final) |
not available |
| Presentation | Ozanich RM, Bruckner-Lea CJ, Straub TM, Valdez CO, Engel E, Bailey VL, Brockman FJ. Oligonucleotide-coupled microspheres: comparison of coupling procedures and effect of oligonucleotide surface density on hybridization efficiency. Presented at the International Symposium on the Interface Between Analytical Chemistry and Microbiology, Richland, WA, April 19, 2004. |
R828039 (Final) |
not available |
| Presentation | Quinonez MJ, Valdez CO, Straub TM, Chandler DP. Development and comparison of bead based cDNA arrays with planar arrays to study gene expression profiles. Presented at the American Society for Microbiology 103rd General Meeting, Washington, DC, May 18-22, 2003. |
R828039 (Final) |
not available |
| Presentation | Shutthanandan JI, Valdez CO, Dockendorff BP, Tarasevich BJ, Bruckner-Lea CJ, Straub TM. Multiplexed detection and differentiation of pathogens in the Enterobacteriaceae family by direct hybridization of mRNA to microarrays. Presented at the American Society for Microbiology 104th General Meeting, New Orleans, LA, May 24, 2004. |
R828039 (Final) |
not available |
| Presentation | Straub TM, Chandler DP, Rochelle PA, DeLeon R. Using DNA microarrays to identify strains and species of Cryptosporidium. Presented at the American Water Works Association Water Quality Technology Conference, Nashville, TN, November 14, 2001. |
R828039 (2002) R828039 (Final) |
not available |
| Presentation | Straub TM, DeLeon R, Chandler DP. Detection of emerging microbial contaminants in source and finished drinking water with DNA microarrays. Presented at the Drinking Water Program Review, Science To Achieve Results (STAR) Program, U.S. Environmental Protection Agency, Silver Spring, MD, 2001. |
R828039 (Final) |
not available |
| Presentation | Straub TM. Towards a unified system for detecting waterborne pathogens. Presented at the National Center for Environmental Research (NCER) Science Seminar Series, Science to Achieve Results (STAR) Program, U.S. Environmental Protection Agency, Washington, DC, April 30, 2002. |
R828039 (2002) R828039 (Final) |
not available |
| Presentation | Straub TM, Rochelle PA, DeLeon R, Chandler DP. The ability of DNA microarrays to detect multiple pathogen threats in drinking water. Presented at the U.S. Environmental Protection Agency Science Forum 2002: Meeting the Challenges, Washington, DC, May 1-2, 2002. |
R828039 (2002) R828039 (Final) |
not available |
| Presentation | Straub TM. DNA microarrays are coming to environmental microbiology: are you ready? Presented at the American Society for Microbiology General Meeting, Salt Lake City, UT, May 19-23, 2002. |
R828039 (2002) R828039 (Final) |
not available |
| Presentation | Straub TM. Recent advances in sample collection and sample processing of water samples: a path towards true multiplexed detection. Presented at the American Water Works Association Water Quality Technology Conference, Seattle, WA, November 10-14, 2002. |
R828039 (Final) |
not available |
| Presentation | Straub TM. Using DNA microarrays to detect multiple pathogen threats in water. Presented at the International Symposium on Waterborne Pathogens, International Water Association and the American Water Works Association, Lisbon, Portugal, September 22-25, 2002. |
R828039 (Final) |
not available |
| Presentation | Straub TM. Microarrays as a tool for the detection of waterborne pathogens. Presented at the Center for Education, Conservation, and Environmental Interpretation, Inter-American University of Puerto Rico, San Juan, Puerto Rico, April 10-11, 2003. |
R828039 (Final) |
not available |
| Presentation | Straub TM. Development of new microbial source tracking methods using random nonamer oligonucleotide microarrays. Presented at the Cambridge Healthtech Institute's Fourth Annual Macroresults for Microarrays, Boston, MA, May 13-14, 2003. |
R828039 (Final) |
not available |
| Presentation | Straub TM. Automated pathogen detection systems for water quality monitoring. Presented at the Water Quality Technology Conference, American Water Works Association, Philadelphia, PA, November 3, 2003. |
R828039 (Final) |
not available |
| Presentation | Straub TM, Quinonez MJ, Valdez CO. Multiplexed detection of indicator bacteria and pathogens in water samples using DNA arrays. Presented at the American Society for Microbiology General Meeting, Washington, DC, 2003. |
R828039 (Final) |
not available |
| Presentation | Straub TM, Bruckner-Lea CJ, Dockendorff BP, Valdez CO, Shutthanandan JI, Quinonez-Diaz MD, Tarasevich BJ, Grate JW. Automated methods for multiplexed pathogen detection. Presented at the 5th International Symposium on the Interface Between Analytical Chemistry and Microbiology, Richland, WA, April 19, 2004. |
R828039 (Final) |
not available |
| Presentation | Straub TM, Valdez CO, Newton GJ. Improved methods for the forensic identification of microbial pathogens. Presented at the American Society of Microbiology Biodefense Conference, Baltimore, MD, March 9, 2004. |
R828039 (Final) |
not available |
| Proceedings | Chandler DP, DeLeon R. Detection of emerging microbial contaminants in source and finished drinking water with DNA microarrays. In: Proceedings of the STAR Drinking Water Program Review, Silver Spring, MD, February 22-23, 2001. |
R828039 (2000) |
not available |
The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Conclusions drawn by the principal investigators have not been reviewed by the Agency.