Grantee Research Project Results
Publications Details for Grant Number R834823
Prediction of Allergenicity by Linear and Conformational Epitopes
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Approaches to Assessing Potential Food Allergy from Genetically Engineered Plants (2009)
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| Reference Type | Citation | Progress Report Year | Document Sources |
|---|---|---|---|
| Abstract | Maleki SJ, Teuber SS, Schein CH. Similar repeated sequences may account for cross-reactions caused by many different nuts. Journal of Allergy and Clinical Immunology 2012;129(2 Suppl):AB233. |
R834823 (2012) R834823 (Final) |
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| Journal Article | Ivanciuc O, Gendel SM, Power TD, Schein CH, Braun W. AllerML: markup language for allergens. Regulatory Toxicology and Pharmacology 2011;60(1):151-160. |
R834066 (Final) R834823 (2011) R834823 (2013) R834823 (Final) |
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| Journal Article | Negi SS, Braun W. Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity. Bioinformatics 2017;33(7):1014-1020. |
R834823 (Final) |
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| Journal Article | Nesbit JB, Hurlburt BK, Schein CH, Cheng H, Wei H, Maleki SJ. Ara h 1 structure is retained after roasting and is important for enhanced binding to IgE. Molecular Nutrition and Food Research 2012;56(11):1739-1747. |
R834066 (Final) R834823 (2012) R834823 (2013) R834823 (Final) |
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| Journal Article | Power TD, Ivanciuc O, Schein CH, Braun W. Assessment of 3D models for allergen research. Proteins 2013;81(4):545-554. |
R834823 (2012) R834823 (2013) R834823 (Final) |
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| Journal Article | Schein CH, Bowen DM, Lewis JA, Choi K, Paul A, van der Heden van Noort GJ, Lu W, Filippov DV. Physicochemical property consensus sequences for functional analysis, design of multivalent antigens and targeted antivirals. BMC Bioinformatics 2012;13(Suppl 13):S9. |
R834066 (Final) R834823 (2012) R834823 (2013) R834823 (Final) |
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| Journal Article | Tiwari R, Negi SS, Braun B, Braun W, Pomes A, Chapman MD, Goldblum RM, Midoro-Horiuti T. Validation of a phage display and computational algorithm by mapping a conformational epitope of Bla g 2. International Archives of Allergy and Immunology 2012;157(4):323-330. |
R833137 (Final) R834823 (2012) R834823 (2013) R834823 (Final) |
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| Presentation | Braun W. The structural biology of allergens. Presented at the Oesper Symposium 2010 honoring Kurt Wuethrich (Nobel Prize 2002 in Chemistry), University of Cincinnati, Cincinnati, OH, October 8, 2010. |
R833137 (Final) R834823 (2011) R834823 (Final) |
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| Presentation | Braun W. Detection and prediction of IgE epitopes in allergens. Presented at the G. Malcolm Trout Visiting Scholar Program, Michigan State University, East Lansing, MI, March 2, 2011. |
R834823 (2011) R834823 (Final) |
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| Presentation | Braun W. Predicting the allergenicity of proteins with software tools in the structural data base of allergenic proteins (SDAP). Presented at the HESI PATC and IFBiC Biotechnology Symposium 2013, Arlington, VA, May 7-8, 2013. |
R834823 (2013) R834823 (Final) |
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| Presentation | Dyer K, Chang JT, Schmid MF, Rixon FJ, Myers CC, Feng J, Wong K, Ambia-Garrido J, Vainrub A, Chen C, Krause K, Power TD, Chen D, Ivanciuc O, Negi SS, Chiu W, Sowers LC, Schein CH, Braun W, Pettitt BM. Unlocking the relationships between macromolecular sequence, structure and function to understand and treat diseases:scientific computing research laboratory. Presented at the the University Core Development Committee & Institute for Translational Research: Research Resource Day, University of Texas Medical Branch, Galveston, TX, March 16, 2012. |
R834823 (2012) R834823 (Final) |
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| Presentation | Ivanciuc O, Midoro-Horiuti T, Schein CH, Goldblum RM, Braun W. Prediction of the peptide cross-reactivity with the mountain cedar allergen Jun a 1. Presented at the 16th Annual Structural Biology Symposium, Hotel Galvez, Galveston, TX, April 8, 2011. |
R834823 (2011) R834823 (Final) |
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| Presentation | Lu W, Schein CH, Braun W. Physico-chemical property (PCP) motifs to identify proteins that could be cross-reactive with known peanut allergens.Presented at the 17th Annual Sealy Center for Structural Biology & Molecular Biophysics Symposium, Hotel Galvez, Galveston, TX, April 27, 2012. |
R834823 (2012) R834823 (Final) |
not available |
| Presentation | Maleki SJ, Teuber SS, Schein CH. Similar repeated sequences may account for cross-reactions caused by many different nuts. Presented at the Annual Meeting of the American Academy of Allergy Asthma and Immunology (AAAAI), Orlando, FL, March 2-6, 2012. |
R834823 (2012) |
not available |
| Presentation | Power TD, Oezguen N, Negi SS, Braun W. A structural comparison of a 3D-model of the peanut allergen Ara h 2 and the recently released X-ray crystal structure. Presented at the 16th Annual Structural Biology Symposium, Hotel Galvez, Galveston, TX, April 8, 2011. |
R834823 (2011) R834823 (Final) |
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| Presentation | Schein CH, Teuber SS, Maleki SJ. Repeated sequences in nut allergens mediate cross reactivity between tree nuts and peanuts. Presented at the 17th Annual Sealy Center for Structural Biology & Molecular Biophysics Symposium, Hotel Galvez, Galveston, TX, April 27, 2012. |
R834823 (2012) R834823 (Final) |
not available |
| Presentation | Schein CH. From interferons to allergens: computational analysis for novel therapies. Presented at the National Institute of General Medical Sciences Internal Seminar, National Institutes of Health, Bethesda, MD, September 24, 2012. |
R834823 (2013) R834823 (Final) |
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| Presentation | Schein CH. Consensus properties of allergens causing clinically significant cross-reactivity between peanut and tree nut allergens. Presented at the HESI PATC and IFBiC Biotechnology Symposium, Arlington, VA, May 7-8, 2013. |
R834823 (2013) R834823 (Final) |
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| Proceedings | Maleki SJ, Cheng H, Schein CH. Cross-reactivity among peanuts and tree nuts. In: Proceedings of the 41st Annual Meeting United States-Japan Cooperative Program in Natural Resources (UJNR), Food and Agriculture Panel, New Orleans, LA, December 8-13, 2012. |
R834823 (2013) R834823 (Final) |
not available |
The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Conclusions drawn by the principal investigators have not been reviewed by the Agency.