Grantee Research Project Results
Publications Details for Grant Number R831628
Development of a Virulence Factor Biochip and its Validation for Microbial Risk Assessment in Drinking Water
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| Reference Type | Reference Title | Journal | Author | Citation | Progress Report Year | Document Sources |
|---|---|---|---|---|---|---|
| Book Chapter | Recent advances and future needs in environmental virology. | None | Wong M, Xagoraraki I, Rose JB | Wong M, Xagoraraki I, Rose JB. Recent advances and future needs in environmental virology. In:Bosch A, ed. Human Viruses in Water, 17:Perspectives in Medical Virology. Elsevier Science, Amsterdam, The Netherlands, 2007, pp. 259-284. |
R831628 (2008) |
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| Journal Article | Multiplex approach for screening genetic markers of microbial indicators. | JOURNAL OF WATER ENVIRONMENT RESEARCH | Stedtfeld RD, Baushke S, Tourlousse D, Chai B, Cole JR, Hashsham SA | Stedtfeld RD, Baushke S, Tourlousse D, Chai B, Cole JR, Hashsham SA. Multiplex approach for screening genetic markers of microbial indicators. Water Environment Research 2007;79(3):260-269. |
R831628 (2006) |
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| Journal Article | Development and experimental validation of a predictive threshold cycle (Ct) equation for quantification of virulence and marker genes using high-throughput nanoliter PCR on OpenArrays. | None | Stedtfeld RD, Baushke SW, Tourlousse DM, Miller SM, Stedtfeld TM, Gulari E, Tiedje JM, Hashsham SA | Stedtfeld RD, Baushke SW, Tourlousse DM, Miller SM, Stedtfeld TM, Gulari E, Tiedje JM, Hashsham SA. Development and experimental validation of a predictive threshold cycle equation for quantification of virulence and marker genes by high-throughput nanoliter-volume PCR on the OpenArray platform. Applied and Environmental Microbiology 2008;74(12):3831-3838. |
R831628 (2008) R833010 (2008) R833010 (Final) |
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| Journal Article | Detection and occurrence of indicator organisms and pathogens. | None | Tourlousse DM, Ahmad F, Stedtfeld RD, Seyrig G, Duran M, Alm EW, Hashsham SA | Tourlousse DM, Ahmad F, Stedtfeld RD, Seyrig G, Duran M, Alm EW, Hashsham SA. Detection and occurrence of indicator organisms and pathogens. Water Environment Research 2008;80(10):898-928. |
R831628 (2008) |
not available |
| Journal Article | Evaluation of public health risks at recreational beaches in Lake Michigan via detection of enteric viruses and a human-specific bacteriological marker. | None | Wong M, Kumar L, Jenkins TM, Xagoraraki I, Phanikumar MS, Rose JB | Wong M, Kumar L, Jenkins TM, Xagoraraki I, Phanikumar MS, Rose JB. Evaluation of public health risks at recreational beaches in Lake Michigan via detection of enteric viruses and a human-specific bacteriological marker. Water Research 2009;43(4):1137-1149. |
R831628 (2008) |
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| Presentation | Evaluation of quantum dots as surrogates for pathogens. | None | Hashsham SA | Hashsham SA. Evaluation of quantum dots as surrogates for pathogens. Presentd at the Joint U.S. Environmental Protection Agency and Department of Homeland Security Conference on Real-World Applications and Solutions for Microbial Risk, April 8-10, 2008. |
R831628 (2008) |
not available |
| Presentation | Hybridization behavior of vancomycin resistance genes in a flow-through DNA biochip using a computational approach. | None | Munir A, Miller SM, Dhawan A, Stedtfeld RD, Rouillard JM, Gulari E, Tiedje JM, Hashsham SA | Munir A, Miller SM, Dhawan A, Stedtfeld RD, Rouillard JM, Gulari E, Tiedje JM, Hashsham SA. Hybridization behavior of vancomycin resistance genes in a flow-through DNA biochip using a computational approach. Presented at the 107th General Meeting of the American Society for Microbiology, Toronto, Ontario, Canada, May 21-25, 2007. |
R831628 (2008) |
not available |
| Presentation | Use of multiple genetic markers as indicators for fecal contamination in environmental water sources. | None | Stedtfeld TM, Stedtfeld RD, Baushke SW, Miller SM, Gulari E, Tiedje JM, Hashsham SA | Stedtfeld TM, Stedtfeld RD, Baushke SW, Miller SM, Gulari E, Tiedje JM, Hashsham SA. Use of multiple genetic markers as indicators for fecal contamination in environmental water sources. Presented at the 107th General Meeting of the American Society for Microbiology, Toronto, Ontario, Canada, May 21-25, 2007. |
R831628 (2008) |
not available |
| Presentation | Investigating occurrences of human adenoviruses in two recreational beaches at the Great Lakes using quantitative real-time PCR. | None | Wong K, Kuo D, Wong M, Rose JB, Xagoraraki I | Wong K, Kuo D, Wong M, Rose JB, Xagoraraki I. Investigating occurrences of human adenoviruses in two recreational beaches at the Great Lakes using quantitative real-time PCR. Poster presented at the 107th ASM General Meeting, 2007. |
R831628 (2008) |
not available |
| Presentation | We’ve got you by your genes – microarrays for the detection of environmental viruses. | None | Wong M, Rose JB | Wong M, Rose JB. We’ve got you by your genes – microarrays for the detection of environmental viruses. Presented at the 2005 Graduate Student Symposium for the Plant Sciences Department, 2005. |
R831628 (2008) |
not available |
| Presentation | An oligonucleotide microarray targeting the major waterborne viral pathogens. | None | Wong M, Rose JB | Wong M, Rose JB. An oligonucleotide microarray targeting the major waterborne viral pathogens. Presented at the International Water Association 5th Biennial World Water Congress, Beijing, China, 2006. |
R831628 (2006) |
not available |
| Presentation | Detection of human pathogenic viruses in wastewater using oligonucleotide microarrays. | None | Wong M, Hashsham SA, Rose JB | Wong M, Hashsham SA, Rose JB. Detection of human pathogenic viruses in wastewater using oligonucleotide microarrays. Presented at the 2006 International Water Association Meeting, Beijing, China, 2006. |
R831628 (2008) |
not available |
| Presentation | Using microarrays to examine environmental matrices for pathogens. | None | Wong M, Hashsham SA, Rose JB | Wong M, Hashsham SA, Rose JB. Using microarrays to examine environmental matrices for pathogens. Presented at the 2006 International Association of Great Lakes Research General Meeting, 2006. |
R831628 (2008) |
not available |
| Presentation | Microarray detection of human viruses from community wastewater systems. | None | Wong M, Hashsham SA, Gulari E, Rose JB | Wong M, Hashsham SA, Gulari E, Rose JB. Microarray detection of human viruses from community wastewater systems. Presented at the U.S. EPA Workshop on Innovative Approaches for Detecting Microorganisms in Water, June 18-20, 2007. |
R831628 (2008) |
not available |
The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Conclusions drawn by the principal investigators have not been reviewed by the Agency.