Science Inventory

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Chao, A., J. Minucci, M. Boyce, T. Cathey, T. Ferland, N. Sayre-Smith, E. Carr, G. Janesch, S. Purucker, D. Smith, A. Rashid, A. Williams, AND J. Sobus. EPA’s Non-Targeted Analysis WebApp: A web-based software tool for production-level NTA. EPA-RTP, Durham, NC, January 30 - 31, 2024. https://doi.org/10.23645/epacomptox.25438639

Schaeffer, B., N. Reynolds, H. Ferriby, W. Salls, D. Smith, J. Johnston, AND M. Myer. Forecasting freshwater cyanobacterial harmful algal blooms for Sentinel-3 satellite resolved U.S. lakes and reservoirs. JOURNAL OF ENVIRONMENTAL MANAGEMENT. Elsevier Science Ltd, New York, NY, 349:119518, (2024). https://doi.org/10.1016/j.jenvman.2023.119518

Chao, A., J. Minucci, M. Boyce, T. Cathey, T. Ferland, E. Carr, G. Janesch, S. Purucker, D. Smith, A. Williams, AND J. Sobus. EPA’s Non-Targeted Analysis WebApp: Linking cheminformatics resources with NTA workflows. Cheminformatics Resources of U.S. Governmental Organizations, Silver Springs, MD, October 18 - 20, 2023. https://doi.org/10.23645/epacomptox.24382585

Chao, A., J. Minucci, M. Boyce, T. Cathey, T. Ferland, E. Carr, G. Janesch, S. Purucker, D. Smith, A. Williams, AND J. Sobus. EPA’s non-targeted analysis webapp: aligning web-based software tools with best practices for NTA. SERMACS, Durham, NC, October 25 - 28, 2023. https://doi.org/10.23645/epacomptox.24520603

Sayre-Smith, N., L. Brunelle, A. Batt, A. Chao, E. Carr, T. Cathey, J. McCord, J. Minucci, Tom Purucker, A. Rashid, D. Smith, A. Williams, D. Alvarez, E. Furlong, S. Glassmeyer, D. Kolpin, M. Mills, AND J. Sobus. Establishing QA/QC Protocols and Tools to Support Non-targeted Analyses of Environmental Matrices. ISES, Chicago, IL, August 27 - 31, 2023. https://doi.org/10.23645/epacomptox.23792595

Ferriby, H., N. Von Tress, B. Schaeffer, W. Salls, D. Smith, AND J. Johnston. Forecasting Cyanobacteria Harmful Algal Blooms Utilizing Spatio-Temporal Integrated Nested Laplace Approximation within the Contiguous United States. 2023 GEO AquaWatch, Tampa, FL, November 13, 2023.

Burke, R., J. Dunken, S. Ghimire, C. Knightes, R. Parmar, D. Smith, Karretta Venable, K. Wolfe, AND J. Johnston. HMS – Hydrologic MicroServices?Using Web Services to Construct Flexible Workflows to Simulate Environmental Flows and Contaminants in Streams. 2023 Association of Clean Water Aministrator's Water Quality Modeling Workshop, Salt Lake City, UT, October 23 - 27, 2023.

Sayre-Smith, N., L. Brunelle, A. Batt, A. Chao, E. Carr, T. Cathey, J. McCord, J. Minucci, S. Purucker, A. Rashid, D. Smith, A. Williams, D. Alvarez, E. Furlong, S. Glassmeyer, D. Kolpin, M. Mills, AND J. Sobus. Quality assurance and quality control workflow for the non-targeted analysis of de facto water reuse. SERMACS, Durham, NC, October 25 - 28, 2023. https://doi.org/10.23645/epacomptox.24498436

Knightes, Chris, B. Rashleigh, F. Cashel, J. Clough, R. Parmar, K. Wolfe, AND D. Smith. Towards a mechanistic modeling framework for simulating eutrophication in estuaries. Coastal & Estuarine Research Foundation Conference, Portland, OR, November 12 - 16, 2023.

Patton, Douglas A, D. Smith, M. Muche, K. Wolfe, R. Parmar, AND JohnM Johnston. Catchment scale runoff time-series generation and validation using statistical models for the Continental United States. ENVIRONMENTAL MODELLING & SOFTWARE. Elsevier Science, New York, NY, 149:105321, (2022). https://doi.org/10.1016/j.envsoft.2022.105321

Smith, D. AND Michael Galvin. CyANWeb User’s Guide. U.S. Environmental Protection Agency, Office of Research and Development, National Center for Environmental Assessment, Washington, DC, EPA/600/B-22/185, 2022.

Smith, D. AND JohnM Johnston. Cyanobacteria Assessment Network (CyAN) Web Application. iEMSs 2022, Brussels, BELGIUM, July 04 - 08, 2022.

Smith, D. Cyanobacteria Assessment Network (CyAN) Web Application. USEPA Region 8 Harmful Algal Blooms Regional Workshops, NA, GA, November 17, 2022.

Schaeffer, B., K. Wolfe, P. Whitman, J. Werdell, E. Urquhart, M. Tomlinson, R. Stumpf, D. Smith, B. Seegers, W. Salls, R. Parmar, M. Papenfus, S. Mishra, A. Meredith, K. Loftin, D. Keith, JohnM Johnston, J. Iiames, E. Hilborn, J. Darling, R. Conmy, M. Coffer, AND S. Bailey. Highlights of the Cyanobacteria Assessment Network: validation, application, and reverberation. Ocean Optics Conference, Binh Dinh, Quy Nhon, VIETNAM, October 02 - 07, 2022.

Patton, Douglas A, M. Cyterski, D. Smith, K. Wolfe, B. Rashleigh, JohnM Johnston, AND R. Parmar. Machine Learning Tools for Predicting Freshwater Fish Populations (ICRW7 Proceedings). In Proceedings, Seventh Interagency Conference on Research in the Watersheds (ICRW7), Tifton, GA, November 16 - 19, 2020. USDA Forest Service, 147, (2022). https://doi.org/10.2737/SRS-GTR-264

Ignatius, A., Tom Purucker, B. Schaeffer, K. Wolfe, E. Urquhart, AND D. Smith. Satellite-derived cyanobacteria frequency and magnitude in headwaters & near-dam reservoir surface waters of the Southern U.S. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, Netherlands, 822:153568, (2022). https://doi.org/10.1016/j.scitotenv.2022.153568

Smith, D., R. Parmar, AND K. Wolfe. Scientific Computing in the Cloud. iEMSs 2022, Brussels, BELGIUM, July 04 - 08, 2022.

Johnston, JohnM, D. Smith, K. Wolfe, AND R. Parmar. Updates and enhancements to USEPA’s CyANWeb web application for early detection of harmful algal blooms to protect human health in recreational waters. iEMSs 2022, Brussels, BELGIUM, July 04 - 08, 2022.

Smith, D. Water Quality Simulations with Dask. iEMSs 2022, Brussels, BELGIUM, July 04 - 08, 2022.

Johnston, JohnM, M. Galvin, B. Schaeffer, D. Smith, R. Parmar, AND K. Wolfe. CyANWeb: Cyanobacteria Assessment Network Cross-Platform Responsive Web Application (NEHA 2021). NEHA 2021 Annual Educational Conference (AEC) & Exhibition, Virtual, June 01 - 02, 2021.

SMITH, D., M. MUCHE, K. L. WOLFE, R. S. PARMAR, AND J. M. JOHNSTON. NHDPlusV2 Catchment Scale Curve Number and NDVI Dataset. U.S. Environmental Protection Agency, Washington, DC, EPA/600/C-21/001, 2021.

Muche, M., S. Sinnathamby, R. Parmar, Chris Knightes, JohnM Johnston, K. Wolfe, Tom Purucker, M. Cyterski, AND D. Smith. Comparison and Evaluation of Gridded Precipitation Datasets in a Kansas Agricultural Watershed Using SWAT. JOURNAL OF THE AMERICAN WATER RESOURCES ASSOCIATION. American Water Resources Association, Middleburg, VA, 56(3):486-506, (2020). https://doi.org/10.1111/1752-1688.12819

Patton, D., M. Cyterski, D. Smith, K. Wolfe, B. Rashleigh, JohnM Johnston, AND R. Parmar. Machine Learning Tools for Predicting Freshwater Fish Populations. ICRW7 2020, Athens, GA, November 16 - 19, 2020.

Cyterski, M., Craig Barber, M. Galvin, R. Parmar, JohnM Johnston, D. Smith, A. Ignatius, L. Prieto, AND K. Wolfe. PiSCES: Pi(scine) Stream Community Estimation System. ENVIRONMENTAL MODELLING & SOFTWARE. Elsevier Science, New York, NY, 127:104703, (2020). https://doi.org/10.1016/j.envsoft.2020.104703

Muche, M., R. Parmar, D. Smith, J. Johnston, AND K. Wolfe. Curve Number Development using Normalized Difference Vegetation Index for the Contiguous United States in Hydrologic Micro Services. 2019 AGU Fall Meeting, San Francisco, CA, December 09 - 13, 2019.