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Records 1 to 25 of 223 records from author Orin Shanks

2024
Sivaganesan, M., J. Willis, A. Diedrich, AND O. Shanks. A fecal score approximation model for analysis of real-time quantitative PCR fecal source identification measurements. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 255:121482, (2024). https://doi.org/10.1016/j.watres.2024.121482
Willis, J., M. Sivaganesan, B. McMinn, A. Korajkic, C. Staley, AND O. Shanks. Human Gut-Associated ΦB124-14 Bacteriophage-Like Quantitative Real-Time PCR Assays for Sewage Measurement. ASM Microbe 2024, Atlanta, GA, June 13 - 17, 2024.
Dean, S., J. Willis, M. Sivaganesan, S. Friedman, AND O. Shanks. Improved Entero1a Quantitative Real-Time PCR Method for Characterization of Enterococcus spp. Levels in Ambient Surface Water Samples. ASM Microbe 2024, Atlanta, GA, June 13 - 17, 2024.
Shanks, O. Microbial Source Tracking with Human-Associated Quantitative Real-Time PCR. Maryland Beach Conference 2024, Baltimore, MD, April 10, 2024.
Paar, John, J. Willis, L. Sette, S. Wood, A. Bogomolni, M. Dulac, M. Sivaganesan, AND O. Shanks. Occurrence of recreational water quality monitoring general fecal indicator bacteria and fecal source identification genetic markers in gray seal scat. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, Netherlands, 934:173220, (2024). https://doi.org/10.1016/j.scitotenv.2024.173220
McMinn, B., A. Korajkic, J. Kelleher, A. Diedrich, A. Pemberton, J. Willis, M. Sivaganesan, B. Shireman, A. Doyle, AND O. Shanks. Quantitative Microbial Source Tracking and Coliphage Monitoring in Small Stream Tributaries (Banklick Watershed Council). Banklick Watershed Council, Fort Wright, KY, June 05, 2024.
Shanks, O., A. Diedrich, M. Sivaganesan, J. Willis, AND A. Shrifi. Quantitative fecal source characterization of urban municipal storm sewer system outfall ‘wet’ and ‘dry’ weather discharges. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 259:121857, (2024). https://doi.org/10.1016/j.watres.2024.121857
Shanks, O. Standard Control Material Development for Quantitative Real-Time PCR Recreational Water Quality Monitoring. EPA Water Research Webinar Series, Cinncinati (Virtual), OH, April 24, 2024.
Diedrich, A., M. Sivaganesan, J. Willis, A. Shrifi, AND O. Shanks. The Occurrence of Clinically Relevant Antibiotic Resistance Genes and Sewage in Urban Municipal Storm Sewer System Outfall ‘Wet’ and ‘Dry’ Weather Discharges. ASM Microbe 2024, Atlanta, GA, June 13 - 17, 2024.
2023
Shanks, O. Development of PCR-Based Enterococci Recreational Water Quality Monitoring Tool. 21st Symposium on Health-related Water Microbiology: WaterMicro2023, Darwin, N/A, AUSTRALIA, June 04 - 09, 2023.
Shanks, O. Fecal Source Characterization of Urban Municipal Stormwater Outfall ‘Wet’ and ‘Dry’ Weather Discharges. Water Quality Technology Conference, Dallas, TX, November 05 - 09, 2023.
Diedrich, A., M. Sivaganesan, J. Willis, A. Shrifi, AND O. Shanks. Genetic Fecal Source Identification in Urban Streams Impacted by Municipal Separate Storm Sewer System Discharges. PLOS ONE . Public Library of Science, San Francisco, CA, 18(1):e0278548, (2023). https://doi.org/10.1371/journal.pone.0278548
Demeter, K., R. Linke, E. Balleste, G. Reischer, R. Mayer, J. Vierheilig, C. Kolm, M. Stevenson, J. Derx, A. Kirschner, R. Sommer, O. Shanks, A. Blanch, J. Rose, W. Ahmed, AND A. Farnleitner. Have genetic targets for faecal pollution diagnostics and source tracking revolutionized water quality analysis yet? FEMS Microbiology Reviews. Oxford University Press, OXFORD, Uk, 47(4):fuad028, (2023). https://doi.org/10.1093/femsre/fuad028
Sivaganesan, M., J. Willis, M. Karim, A. Babatola, D. Catoe, A. Boehm, M. Wilder, H. Green, A. Lobos, V. Harwood, S. Hertel, Rich Haugland, R. Klepikow, M. Howard, P. Laksanalamai, A. Roundtree, M. Mattioli, S. Eytcheson, M. Molina, M. Lane, R. Rediske, A. Ronan, N. D’Souza, J. Rose, A. Shrestha, C. Hoar, A. Silverman, W. Faulkner, K. Wickman, J. Kralj, S. Servetas, M. Hunter, S. Jackson, AND O. Shanks. NIST SRM® 2917 Interlaboratory Performance and Quantitative PCR Performance Benchmarks. ASM Microbe, Houston, TX, June 04 - 09, 2023.
Willis, J., M. Sivaganesan, J. Kralj, S. Servetas, M. Hunter, S. Jackson, AND O. Shanks. NIST SRM® 2917 Interlaboratory Performance and Quantitative PCR Testing Benchmarks. 21st Symposium on Health-related Water Microbiology WaterMicro2023, Houston, TX, June 15 - 19, 2023.
2022
Cyterski, M., O. Shanks, P. Wanjugi, B. McMinn, A. Korajkic, K. Oshima, AND R. Haugland. Bacterial and Viral Fecal Indicator Predictive Modeling Using Gradient Boosting at Three Great Lakes Recreational Beach Sites. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 223:118970, (2022). https://doi.org/10.1016/j.watres.2022.118970
Shanks, O., J. Willis, Mano Sivaganesan, J. Kralj, S. Servetas, M. Hunter, AND S. Jackson. Development and Performance Assessment of NIST SRM® 2917. Public Health and Water Conference: Wastewater Disease Surveillance Summit, Cincinnati, OH, March 21 - 24, 2022.
Shanks, O., J. Willis, Mano Sivaganesan, J. Kralj, S. Servetas, M. Hunter, AND S. Jackson. Development and Performance Assessment of NIST SRM® 2917 (Presentation). EPA Recreational Water Quality Call, Virtual, OH, September 07, 2022.
Shanks, O., A. Diedrich, Mano Sivaganesan, A. Sharifi, AND J. Willis. Fecal Source Characterization of Impaired Urban Streams Impacted by Municipal Stormwater Discharges. ASM Microbe 2022, Washington, DC, June 09 - 13, 2022.
Sivaganesan, M., J. Willis, M. Karim, A. Babatola, D. Catoe, A. Boehm, M. Wilder, H. Green, A. Lobos, V. Harwood, S. Hertel, R. Klepikow, M. Howard, P. Laksanalamai, A. Roundtree, M. Mattioli, S. Eytcheson, M. Molina, M. Lane, R. Rediske, A. Ronan, N. D'Souza, J. Rose, A. Shrestha, C. Hoar, A. Silverman, W. Faulkner, K. Wickman, J. Kralj, S. Servetas, M. Hunter, S. Jackson, AND O. Shanks. Interlaboratory performance and quantitative PCR data acceptance metrics for NIST SRM® 2917. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 225:119162, (2022). https://doi.org/10.1016/j.watres.2022.119162
Ahmed, W., S. Simpson, P. Bertsch, K. Bibby, A. Bivins, L. Blackall, S. Bofill-Mas, A. Bosch, J. Brandão, P. Choih, M. Ciesielski, E. Donner, N. D'Souza, A. Farnleitner, D. Gerrity, R. Gonzalez, J. Griffith, P. Gyawali, C. Haas, K. Hamilton, H. ChandithaHapuarachchi, V. Harwood, R. Haque, G. Jackson, S. Khan, W. Khan, M. Kitajima, A. Korajkic, G. La Rosa, B. Layton, E. Lipp, S. McLellan, B. McMinn, G. Medema, S. Metcalfe, W. Meijer, J. Mueller, H. Murphy, C. Naughton, R. Noble, S. Payyappat, S. Pettersonak, T. Pitkänenam, V. Rajal, B. Reyneke, F. Roman, J. Rose, M. Rusiñol, M. Sadowsky, L. Sala-Comorera, Y. Setoh, S. Sherchan, K. Sirikanchana, W. Smith, AND J. Steele. Minimizing errors in RT-PCR detection and quantification of SARS-CoV-2 RNA for wastewater surveillance. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, Netherlands, 805:149877, (2022). https://doi.org/10.1016/j.scitotenv.2021.149877
Willis, J., M. Sivaganesan, R. Haugland, J. Kralj, S. Servetas, M. Hunter, S. Jackson, AND O. Shanks. Performance of NIST SRM® 2917 with 13 Recreational Water Quality Monitoring qPCR Assays. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 212:118114, (2022). https://doi.org/10.1016/j.watres.2022.118114
Shanks, O. Science to Support Recreational Water Quality Criteria Development and Implementation. EPA ROCS-Net, Cincinnati, OH, April 05, 2022.
Serveta, S., K. Parratt, N. Brinkman, O. Shanks, T. Smith, P. Mattson, AND N. Lin. Standards to support an enduring capability in wastewater surveillance for public health: Where are we? Case Studies in Chemical and Environmental Engineering. Elsevier B.V., Amsterdam, Netherlands, 6:100247, (2022). https://doi.org/10.1016/j.cscee.2022.100247