Grantee Research Project Results
Selected Publications Details for Grant Number R840032
Integrating tissue chips, rapid untargeted analytical methods and molecular modeling for toxicokinetic screening of chemicals, their metabolites and mixtures
RFA:
Advancing Toxicokinetics for Efficient and Robust Chemical Evaluations (2019)
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Reference Type | Citation | Progress Report Year | Document Sources |
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Journal Article | Aly N, Dodds J, Luo Y, Grimm F, Foster M, Rusyn I, Baker E. Utilizing ion mobility spectrometry-mass spectrometry for the characterization and detection of persistent organic pollutants and their metabolites. ANALYTICAL AND BIOANALYTICAL CHEMISTRY 2021;414(3):1245-1258 |
R840032 (2022) |
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Journal Article | Baker E, Hoang C, Uritboonthai W, Heyman H, Pratt B, MacCross M, MacLean B, Plumb R, Aisporna A, Siuzdak G. METLIN-CCS:an ion mobility spectrometry collision cross section database. NATURE METHODS 2023;1-2. |
R840032 (2023) |
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Journal Article | Chappel J, King M, Fleming J, Eberlin L, Reif D, Baker E. Aggregated Molecular Phenotype Scores: Enhancing Assessment and Visualization of Mass Spectrometry Imaging Data for Tissue-Based Diagnostics. ANALYTICAL CHEMISTRY 2023;Online ahead of print |
R840032 (2023) |
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Journal Article | Chappel J, Kirkwood-Donelson K, Reif D, Baker E. From big data to big insights: statistical and bioinformatic approaches for exploring the lipidome. ANALYTICAL AND BIOANALYTICAL CHEMISTRY 2023; |
R840032 (2023) |
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Journal Article | Dodds J, Baker E. Improving the Speed and Selectivity of Newborn Screening Using Ion Mobility SpectrometryâMass Spectrometry. ANALYTICAL CHEMISTRY 2021;93(51):17094-17102 |
R840032 (2022) |
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Journal Article | Foley M, Walker M, Stewart A, O'Flaherty S, Gentry E, Patel S, Beaty V, Allen G, Pan M, Simpson J, Perkins C, Vanoy M, Doughtery M, McGill S, Gulati A, Dorrenstein P, Baker E, Redinbo M, Barrangou R, Theriot C. Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut. NATURE MICROBIOLOGY 2023;8(4):611-628 |
R840032 (2022) |
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Journal Article | Foster M, Rainey M, Watson C, Dodds J, Kirkwood K, Fernandez F, Baker E. Uncovering PFAS and Other Xenobiotics in the Dark Metabolome Using Ion Mobility Spectrometry, Mass Defect Analysis, and Machine Learning. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2022;56(12):9133-9143 |
R840032 (2022) |
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Journal Article | Kirkwood K, Fleming J, Nguyn F, Reif D, Baker E, Belcher S. Utilizing Pine Needles to Temporally and Spatially Profile Per- and Polyfluoroalkyl Substances (PFAS). ENVIRONMENTAL SCIENCE & TECHNOLOGY 2022;56(6):3441-3451 |
R840032 (2022) |
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Journal Article | Lin H, Chiu W. Development of a Physiologically Based Gut Absorption Model for Probabilistic Prediction of Environmental Chemical Bioavailability. ALTEX-ALTERNATIVES TO ANIMAL EXPERIMENTATION 2023;40(3):471-484 |
R840032 (2023) |
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Journal Article | Mirfazaelian A, Kim K-B, Anand SS, Kim HJ, Tornero-Velez R, Bruckner JV, Fisher JW. Development of a physiologically based pharmacokinetic model for deltamethrin in the adult male Sprague-Dawley rat. Toxicological Sciences 2006;93(2):432-442. |
R830800 (2005) R830800 (2006) R830800 (Final) R840032 (2023) |
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Journal Article | Odenkirk M, Zheng X, Kyle J, Stratton K, Niorca C, Bloodsworth K, Mclean C, Masters C, Monroe M, Doecke J, Smith R, Burnum-Johnson K, Roberts B, Baker E. Deciphering ApoE Genotype-Driven Proteomic and Lipidomic Alterations in Alzheimer's Disease Across Distinct Brain Regions. JOURNAL OF PROTEOME RESEARCH 2024; |
R840032 (2023) |
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Journal Article | Sakolish C, Reese CE, Luo YS, Valdiviezo A, Schurdak ME, Gough A, Taylor DL, Chiu WA, Venetti LA, Rusyn I. Analysis of reproducibility and robustness of a human microfluidic four-cell liver acinus microphysiology system (LAMPS). Toxicology 2021;448. |
R835736 (Final) R840032 (2021) |
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Journal Article | Stewart AK, Foley MH, Doughetry MK,. McGill, SK, Gulati AS, Gentry EC, Hagey LR, Dorrenstein PC, Theirot CM, Dodds JN, Baker ES. Using Multidimensional Separations to Distinguish Isomeric Amino Acid-Bile Acid Conjugates and Assess Their Presence and Perturbations in Model Systems.ANALYTICAL CHEMISTRY 2023;95(41):15357-15366. |
R840032 (2023) |
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Journal Article | Dodds JN, Alexander NL, Kirkwood KI, Foster MR, Hopkins ZR, Knappe DR, Baker ES. From Pesticides to Per-and Polyfluoroalkyl Substances:An Evaluation of Recent Targeted and Untargeted Mass Spectrometry Methods for Xenobiotics. Analytical chemistry 2020;93(1):641-56. |
R840032 (2021) |
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Journal Article | Odenkirk MT, Reif DM, Baker ES. Multiomic Big Data Analysis Challenges:Increasing Confidence in the Interpretation of Artificial Intelligence Assessments. Analytical Chemistry 2021. |
R840032 (2021) R840032 (2022) |
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Journal Article | Rusyn I, Roth A. Editorial overview of the special issue on application of tissue chips in toxicology. Toxicology 2021:152687-. |
R840032 (2021) |
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The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Conclusions drawn by the principal investigators have not been reviewed by the Agency.