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Shanks, O., H. Green, A. Korajkic, AND K. Field. Overview of Microbial Source Tracking Methods Targeting Human Fecal Pollution Sources. Chapter 3, Cindy H. Nakatsu, Robert V. Miller, Suresh D. Pillai (ed.), Manual of Environmental Microbiology, 4th Edition. American Society for Microbiology. ASM Press, Washington, DC, , 3.4.3-1 - 3.4.3-8, (2015).

Shanks, O., C. Kelty, L. Peed, Mano Sivaganesan, T. Mooney, AND M. Jenkins. Age-Related Shifts in the Density and Distribution of Genetic Marker Water Quality Indicators in Cow and Calf Feces (Journal). APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 80(5):1588-1594, (2014).

Korajkic, A., B. McMinn, O. Shanks, Mano Sivaganesan, Shay Fout, AND N. Ashbolt. Biotic interactions and sunlight affect persistence of fecal indicator bacteria and microbial source tracking genetic markers in the Upper Mississippi River. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 80(13):3952-3961, (2014).

Riedel, T., A. Zimmer-Faust, V. Thulsiraj, T. Madi, K. Hanley, D. Ebentier, M. Byappanahalli, B. Layton, M. Raith, A. Boehm, J. Griffith, P. Holden, O. Shanks, S. Weisberg, AND J. Jay. Detection limits and cost comparisons of human- and gull-associated conventional and quantitative PCR assays in artificial and environmental waters. JOURNAL OF ENVIRONMENTAL MANAGEMENT. Elsevier Science Ltd, New York, NY, 136:112-120, (2014).

Green, H., K. White, C. Kelty, AND O. Shanks. Development and Testing of Novel Canine Fecal Source-Identification Assays. Presented at 114th American Society for Microbiology General Meeting, #1862, Boston, MA, May 17 - 20, 2014.

Green, H. C., Karen M. White, C. A. Kelty, AND O. C. Shanks. Development of Rapid Canine Fecal Source Identification PCR-based Assays. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, 48(19):11453-11461, (2014).

Molina, M., S. Hunter, Mike Cyterski, L. Peed, C. Kelty, Mano Sivaganesan, T. Mooney, L. Prieto, AND O. Shanks. Factors affecting the presence of human-associated and fecal indicator real-time quantitative PCR genetic markers in urban-impacted recreational beaches. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 64:196-208, (2014).

Shanks, O. Fecal Source Identification: Method Standardization and Field Demonstrations. Presented at Laboratory Technical Information Group 2014 meeting, Cincinnati, OH, April 30, 2014.

Shanks, O. Fecal Waste Contaminates Our Waterways: Molecular Technologies Offer New Solutions. To be Presented at Safe and Sustainable Water Resources: Webinar Series, Cincinnati, OH, December 17, 2014.

SHANKS, O. C., L. PEED, M. SIVAGANESAN, R. A. HAUGLAND, AND E. C. CHERN. Human fecal source identification with real-time quantitative PCR. 2nd, Chapter 7, Paulsen I., Holmes A. (ed.), Environmental Microbiology, Methods in Molecular Biology Series. Humana Press Incorporated, Totowa, NJ, 1096:85-99, (2014).

Green, H., J. Fisher, S. Huse, M. Slogin, S. McLellan, AND O. Shanks. Identification of Bacterial Specialists in Hosts belonging to Aves, Mammalia, and Pisces. Presented at 114th American Society for Microbiology General Meeting, #1749, Boston, MA, May 17 - 20, 2014.

Green, H., Rich Haugland, M. Varma, H. Millen, M. Borchardt, K. Field, W. Walters, R. Knight, Mano Sivaganesan, C. Kelty, AND O. Shanks. Improved HF183 quantitative real-time PCR assay for characterization of human fecal pollution in ambient surface water samples. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 80(10):3086-3094, (2014).

Wang, D., H. Green, O. Shanks, AND A. Boehm. New Performance Metrics for Quantitative Polymerase Chain Reaction-Based Microbial Source Tracking Methods. Environmental Science & Technology Letters. American Chemical Society, Washington, DC, 1(1):20-25, (2014).

Ervin, J. S., T. L. Russell, B. A. Layton, K. M. Yamahara, D. Wang, L. M. Sassoubre, Y. Cao, C. A. Kelty, Mano Sivaganesan, A. B. Boehm, P. A. Holden, S. B. Weisberg, AND O. C. Shanks. Characterization of fecal concentrations in human and other animal sources by physical, culture-based, and quantitative real-time PCR methods. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 47(18):6873-6882, (2013).

Raith, M. R., C. A. Kelty, J. F. Griffith, A. Schriewer, S. Wuertz, S. Mieszkin, M. Gourmelon, G. H. Reischer, A. H. Farnleitner, J. S. Ervin, P. A. Holden, D. L. Ebentier, J. A. Jay, D. Wang, A. B. Boehm, T. Gim Aw, J. B. Rose, E. Balleste, W. G. Meijer, Mano Sivaganesan, AND O. C. Shanks. Comparison of PCR and quantitative real-time PCR methods for the characterization of ruminant and cattle fecal pollution sources . WATER RESEARCH. Elsevier Science Ltd, New York, NY, 47(18):6921-6928, (2013).

Shanks, O. C., R. J. Newton, C. A. Kelty, S. M. Huse, M. L. Sogin, AND S. L. McLellan. Comparison of the Microbial Community Structures of Untreated Wastewaters from Different Geographic Locales. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 79(9):2906-2913, (2013).

Korajkic, A., B. McMinn, V. Harwood, O. Shanks, Shay Fout, AND N. ASHBOLT. Differential decay of Enterococci and Escherichia coli originating from two fecal pollution sources. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 79(7):2488-2492, (2013).

Wang, D., A. H. Farnleitner, K. G. Field, H. C. Green, O. C. Shanks, AND A. B. Boehm. Enterococcus and Escherichia coli fecal source apportionment with microbial source tracking genetic markers - is it feasible? WATER RESEARCH. Elsevier Science Ltd, New York, NY, 47(18):6849-6861, (2013).

Ebentier, D., K. Hanley, Y. Cao, B. Badgley, A. Boehm, J. Ervin, K. Goodwin, M. Gourmelon, J. Griffith, P. Holden, C. Kelty, S. Lozach, C. McGee, L. Peed, M. Raith, H. Ryu, M. Sadowsky, E. Scott, J. Santodomingo, A. Schriewer, C. Sinigalliano, O. Shanks, L. Van De Werfhorst, D. Wang, S. Wuertz, AND J. Jay. Evaluation of the repeatability and reproducibility of a suite of qPCR based microbial source tracking methods. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 47(18):6839–6848, (2013).

Shanks, O. HUMAN FECAL SOURCE IDENTIFICATION: REAL-TIME QUANTITATIVE PCR METHOD STANDARDIZATION - abstract. Presented at 17th International Symposium on Health-Related Water Microbiology, Florianopolis, BRAZIL, September 15 - 20, 2013.

Shanks, O. Human Fecal Source Identification: Real-Time Quantitative PCR Method Standardization. Presented at 17th International Symposium on Health-Related Water Microbiology, Florianopolis, BRAZIL, September 15 - 20, 2013.

Millen, H., S. Spencer, O. Shanks, H. Green, C. Kelty, Rich Haugland, J. Gonnering, AND M. Borchardt. Improved HF183 reverse primer and probe for greater analytical sensitivity of human Bacteroides in the environment. Presented at American Society for Microbiology 2013, Denver, CO, May 18 - 21, 2013.

Korajkic, A., B. McMinn, L. Parfrey, R. Knight, AND O. Shanks. Influence of Solar Radiation and Biotic Interactions on Bacterial and Eukaryotic Communities Associated with Sewage Decomposition in Ambient Water - Poster. Presented at 2013 ASM 113th General Meeting, Denver, CO, May 18 - 21, 2013.

Korajkic, A., B. McMinn, L. Parfrey, R. Knight, AND O. Shanks. Influence of solar radiation and biotic interactions on bacterial and eukaryotic communities associated with sewage decomposition in ambient water. Presented at ASM 2013 113th General Meeting, Denver, CO, May 18 - 21, 2013.

Schriewer, A., K. Goodwin, C. Sinigalliano, A. Cox, D. Wanless, J. Bartkowiak, D. Ebentier, K. Hanley, J. Ervin, L. Deering, O. Shanks, L. Peed, W. Meijer, J. Griffith, J. Santodomingo, J. Jay, P. Holden, AND S. Wuertz. Performance evaluation of canine-associated Bacteroidales assays in a multi-laboratory comparison study. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 47(18):6909-6920, (2013).