Science Inventory

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Cao, Y., Mano Sivaganesan, C. Kelty, D. Wang, A. Boehm, J. Griffith, S. Weisberg, AND O. Shanks. A Human Fecal Contamination Score for Ranking Recreational Sites using the HF183/BacR287 Quantitative Real-Time PCR Method. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 128:148-156, (2018). https://doi.org/10.1016/j.watres.2017.10.071

Mayer, R., G. Reischer, S. Ixenmaier, J. Derx, A. Blaschke, J. Ebdon, R. Linke, L. Egle, W. Ahmed, A. Blanch, D. Byamukama, M. Savill, D. Mushi, H. Cristobal, T. Edge, M. Schade, A. Aslan, Y. Brooks, R. Sommer, Y. Masago, M. Sato, H. Taylor, J. Rose, S. Wuertz, O. Shanks, H. Piringer, R. Mach, D. Savio, M. Zessner, AND A. Farnleitner. Global Distribution of Human-Associated Fecal Genetic Markers in Reference Samples from Six Continents. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, 52(9):5076-5084, (2018). https://doi.org/10.1021/acs.est.7b04438

Shanks, O. Human Fecal Source Identification with Quantitative Real-Time PCR. Center for Disease Control and Prevention Division of Viral Diseases, Atlanta, GA, January 29, 2018.

Shanks, O. Microbial Source Tracking: From Basic Science to Management Tool. Presented at Annual UNC Water Microbiology Meeting, Chapel Hill, NC, May 22, 2018.

Zimmer-Faust, A., C. Brown, Jim Kaldy, TChris MochonCollura, O. Shanks, W. Rugh, Pat Clinton, J. Stecher, A. Manderson, AND Y. Johnson. Patterns and sources of nitrogen and microbial contamination in a Pacific Northwest estuarine watershed. UNC Water Microbiology, Chapel Hill, North Carolina, May 22 - 24, 2018.

Li, X., Mano Sivaganesan, C. Kelty, A. Zimmer-Faust, Pat Clinton, J. Reichman, Y. Johnson, W. Matthews, S. Bailey, AND O. Shanks. Quantitative Microbial Source Tracking in the Tillamook Basin. Oregon Dept of Environmental Quality Thirsty for Knowledge Seminar Series, Portland,OR, January 18, 2018.

Li, X., M. SIVAGANESAN, C. A. KELTY, A. ZIMMER-FAUST, P. J. CLINTON, J. R. REICHMAN, Y. JOHNSON, W. Matthews, B. HORN, S. BAILEY, AND O. C. SHANKS. Quantitative Microbial Source Tracking in the Tillamook Basin, Seattle. Annual LTIG Meeting, Seattle,WA, May 16, 2018.

Li, X., Mano Sivaganesan, C. Kelty, A. Zimmer-Faust, Pat Clinton, J. Reichman, Y. Johnson, W. Matthews, B. Horn, S. Bailey, AND O. Shanks. Quantitative Real-Time PCR Fecal Source Identification in the Tillamook Basin. National Water Quality Council, Cincinnati, OH, February 23, 2018.

Li, X., Mano Sivaganesan, C. Kelty, A. Zimmer-Faust, Pat Clinton, J. Reichman, Y. Johnson, W. Matthews, S. Bailey, AND O. Shanks. Quantitative Real-Time PCR Fecal Source Identification in the Tillamook Basin - Cincinnati. Presented at DNA RFP Webinar, Cincinnati, OH, February 06, 2018.

Shanks, O. Use of Microbial Source Tracking Tools in Waterborne Disease Outbreak Response. SSWR Webinar, Cincinnati, OH, June 27, 2018.

Korajkic, A., B. McMinn, V. Harwood, N. Ashbolt, Mano Sivaganesan, AND O. Shanks. Differential Decay of Cattle-associated Fecal Indicator Bacteria and Microbial Source Tracking Markers in Fresh and Marine Water. ASM Microbe 2017, New Orleans, LA, June 01 - 05, 2017.

Korajkic, A., B. McMinn, V. Harwood, N. Ashbolt, Mano Sivaganesan, AND O. Shanks. Differential Decay of Cattle-associated Fecal Indicator Bacteria and Microbial Source Tracking Markers in Fresh and Marine Water (ASM 2017 Presentation). ASM Microbe 2017, New Orleans, LA, June 01 - 05, 2017.

Shrestha, A., C. Kelty, Mano Sivaganesan, O. Shanks, AND S. Dorevitch. Examining trends in general fecal indicator bacteria and microbial source tracking genetic markers at non-point source impacted Chicago beaches. Presented at Water Microbiology Conference 2017, Chapel Hill, NC, May 15 - 19, 2017.

Shanks, O. Implementation of Molecular Human Fecal Source Identification Technologies. To be Presented at 2017 American Public Health Laboratory National Meeting, Providence, RI, June 11 - 14, 2017.

Shanks, O. Microbial Source Tracking DOEE Briefing. To be Presented at DOEE Briefing (Webinar), Cincinnati, OH, October 20, 2017.

Shanks, O. Microbial Source Tracking, SOL2017 Workshop. International Association for Great Lake Research SOL2017 Annual Meeting, Green Bay, WI, November 07 - 08, 2017.

Stachler, E., C. Kelty, Mano Sivaganesan, X. Li, K. Bibby, AND O. Shanks. Quantitative CrAssphage PCR Assays for Human Fecal Pollution Measurement. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, 51(16):9146-9154, (2017). https://doi.org/10.1021/acs.est.7b02703

Li, X., Mano Sivaganesan, C. Kelty, A. Zimmer-Faust, Pat Clinton, J. Reichman, Y. Johnson, W. Matthews, S. Bailey, AND O. Shanks. Quantitative Real-Time PCR Fecal Source Identification in the Tillamook Basin (abstract). Presented at Water Microbiology Conference 2017, Chapel Hill, NC, May 15 - 19, 2017.

Li, X., Mano Sivaganesan, C. Kelty, A. Zimmer-Faust, Pat Clinton, J. Reichman, Y. Johnson, W. Matthews, S. Bailey, AND O. Shanks. Quantitative Real-Time PCR Fecal Source Identification in the Tillamook Basin, Bellingham, WA. 2017 EPA Region10 AFO/CAF) Workshop, Bellingham,WA, September 13, 2017.

Li, X., L. peed, Mano Sivaganesan, C. Kelty, C. Neitch, AND O. Shanks. Simultaneous measurement of genetic fecal indicators in water column and periphyton biofilms in artificial streams - abstract. To be Presented at Water Microbiology Conference 2017, Chapel Hill, NC, May 15 - 19, 2017.

Cao, Y., Mano Sivaganesan, C. Kelty, D. Wang, A. Boehm, J. Griffith, S. Weisberg, AND O. Shanks. A human fecal contamination index for ranking impaired recreational watersusing the HF183 quantitative real-time PCR method. Presented at Water Microbiology Conference, UNC Water Institute, Chapel Hill, NC, May 17 - 19, 2016.

Wanjugi, P. AND O. Shanks. Assessment of Diffuse Sources of Human Fecal Pollution. Presented at Ohio Onsite Wastewater Annual Conference, Mt. Sterling, OH, January 12 - 14, 2016.

Shanks, O., C. Kelty, R. Oshiro, Rich Haugland, T. Madi, L. Brooks, K. Field, AND Mano Sivaganesan. Data Acceptance Criteria for Standardized Human-Associated Fecal Source Identification Quantitative Real-Time PCR Methods. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 82(9):2773-2782, (2016).

Stachler, E., C. Kelty, K. Bibby, AND O. Shanks. Development of Cross-Assembly Phage PCR-Based Methods for Human Fecal Source Identification. Presented at Water Microbiology Conference, Chapel Hill, NC, May 17 - 19, 2016.

Wanjugi, P., Mano Sivaganesan, C. Kelty, A. Korajkic, B. McMinn, R. Ulrich, V. Harwood, AND O. Shanks. Differential Decay of Bacterial and Viral Fecal Indicators in Common Human Pollution Sources. Presented at 2016 Recreational Waters Conference, New Orleans, LA, April 12 - 15, 2016.