Keely, S., M. Herrmann, A. Korajkic, N. Brinkman, B. McMinn, Shay Fout, AND E. Villegas. Genome Sequences of Escherichia Bacteriophages Isolated from Raw Wastewater. Microbiology Resource Announcements. American Society for Microbiology, Washington, DC, 8(26):e00135-19, (2019). https://doi.org/10.1128/MRA.00135-19

Lu, J., S. Keely, T. Gruber, I. Struewing, E. Villegas, AND N. Ashbolt. Genome characteristics and infectivity of a Campylobacter jejuni 63A isolated from California gull (Larus californicus) excreta. ASM Microbe 2019, San Francisco, CA, June 20 - 24, 2019.

Keely, S. Geospatial Patterns of AMR Genes in 1.2 Million Kilometers of US Rivers and Streams. UNC Water Microbiology Conference 2019, Chapel Hill, NC, May 13 - 16, 2019.

Keely, S. Geospatial Patterns of Antimicrobial Resistance Genes in U.S. Rivers and Streams. EPA ORD Water Research Webinar Series, Cincinnati, Ohio, September 18, 2019.

Reyes, V., P. Gedalanga, N. Merino, J. Van Nostrand, S. Keely, S. De Long, J. Zhou, AND S. Mahendra. Differential Sensitivity of Wetland-Derived Nitrogen Cycling Microorganisms to Copper Nanoparticles. ACS Sustainable Chemistry & Engineering. American Chemical Society, Washington, DC, 6(9):11642–11652, (2018). https://doi.org/10.1021/acssuschemeng.8b01868

Varughese, E., N. Brinkman, E. Anneken, J. Cashdollar, Shay Fout, E. Furlong, D. Kolpin, S. Glassmeyer, AND S. Keely. Estimating virus occurrence using Bayesian modeling in multiple drinking water systems of the United States. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, Netherlands, 619620:1330-1339, (2018).

Haugland, Rich, S. Siefring, E. Anneken, M. Varma, S. Keely, R. Mitchell, AND S. Lehmann. Low Frequencies of Interference to EPA Quantitative Polymerase Chain Reaction (qPCR) Methods for Microbial Water Quality Monitoring in U.S. Rivers and Streams and Coastal Waters. 2018 UNC Water Microbiology Conference, Chapel Hill, NC, May 22 - 24, 2018.

Jahne, M., K. Helmick, G. Eades, M. Pait, S. Pfaller, D. King, N. Brinkman, S. Keely, M. Nye, AND J. Garland. Microbial Risk Assessment of Air Conditioning Condensate Reuse. 2018 Water Research Foundation Conference, Atlanta, GA, May 07 - 08, 2018.

Brinkman, N., E. Villegas, J. Garland, AND S. Keely. Reducing inherent biases introduced during DNA viral metagenome analyses of municipal wastewater. PLOS ONE . Public Library of Science, San Francisco, CA, 13(4):e0195350, (2018).

Brinkman, N., S. Keely, E. Anneken, M. Jahne, AND J. Garland. Endogenous System Microbes as Treatment Process Indicators for Decentralized Non-potable Water Reuse. 11th IWA International Conference on Water Reclamation and Reuse, Long Beach, CA, July 23 - 27, 2017.

Garland, J., N. Brinkman, S. Keely, M. Jahne, J. Cashdollar, A. Morgan, M. Nye, B. Zimmerman, Cissy Ma, A. Henderson, M. Small, M. Schoen, N. Ashbolt, X. Xue, S. Cashman, AND B. Crone. Pathogen Treatment Guidance and Monitoring Approaches fro On-Site Non-Potable Water Reuse. Water Wastewater Equipment Treatment & Transport Show, Indianapolis, IN, February 22 - 25, 2017.

Brinkman, N., Shay Fout, AND S. Keely. Retrospective Surveillance of Wastewater To Examine Seasonal Dynamics of Enterovirus Infections. mSphere. American Society for Microbiology, Washington, DC, 2(3):e00099-17, (2017).

Jahne, M., M. Schoen, N. Ashbolt, N. Brinkman, S. Keely, AND J. Garland. Risk-Based Treatment Targets for Onsite Non-Potable Water Reuse. 14th Cincinnati Area Water Distribution System Seminar, Cincinnati, OH, April 27, 2017.

Alum, A., E. Villegas, S. Keely, K. Bright, L. Sifuentes, AND M. Abbaszadegan. Detection of Protozoa in Surface and Finished Waters. Chapter 316, Manual of Environmental Microbiology. ASM Press, Washington, DC, , 3.1.6-1-3.1.6-25, (2016).

Garland, J., M. Schoen, B. Zimmerman, S. Keely, N. Brinkman, S. De Long, S. Sharvelle, AND M. Jahne. Pathogen Treatment Guidance and Monitoring Approaches for On-Site Non-Potable Water (2016 Southwest Onsite Wastewater Conference). 2016 Southwest Onsite Wastewater Conference, Laughlin, NV, February 03 - 04, 2016.

Staggs, S., S. Keely, M. Ware, N. Schable, MaryJean See, D. Gregorio, X. Zou, C. Su, J. Dubey, AND E. Villegas. The development and implementation of a method using blue mussels (Mytilus spp.) as biosentinels of Cryptosporidium spp. and Toxoplasma gondii contamination in marine aquatic environments. Springer, New York, NY.

Zimmerman, B., N. Ashbolt, J. Garland, S. Keely, AND D. Wendell. Human Mitochondrial DNA and Endogenous Bacterial Surrogates for Risk Assessment of Graywater Reuse. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, 48(14):7993-8002, (2014).

Ware, M., S. Keely, AND E. Villegas. Development and evaluation of an off-the-slide genotyping technique for identifying Giardia cysts and Cryptosporidium oocysts directly from US EPA Method 1623 slides. JOURNAL OF APPLIED MICROBIOLOGY. Blackwell Publishing, Malden, MA, 115(1):298-309, (2013).

Staggs, S., E. Beckman, S. Keely, R. Mackwan, M. Ware, A. Moyer, J. Ferretti, A. Sayed, L. Xiao, AND E. Villegas. The applicability of TaqMan-based quantitative real-time PCR assays for detecting and enumeratIng Cryptosporidium spp. oocysts in the environment. PLOS ONE . Public Library of Science, San Francisco, CA, 8(6):e66562, (2013).