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Sivaganesan, Mano, C. Kelty, R. Oshiro, T. Madi, L. Brooks, K. Field, AND O. Shanks. Interlaboratory Variability in Human-Associated Fecal Source Identification qPCR Conditions for Data Acceptance. Presented at Water Microbiology Conference 2015, Chapel Hill, NC, May 18 - 21, 2015.

Shanks, O., C. Kelty, L. Peed, Mano Sivaganesan, T. Mooney, AND M. Jenkins. Age-Related Shifts in the Density and Distribution of Genetic Marker Water Quality Indicators in Cow and Calf Feces (Journal). APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 80(5):1588-1594, (2014).

Green, H., K. White, C. Kelty, AND O. Shanks. Development and Testing of Novel Canine Fecal Source-Identification Assays. Presented at 114th American Society for Microbiology General Meeting, #1862, Boston, MA, May 17 - 20, 2014.

Green, H. C., Karen M. White, C. A. Kelty, AND O. C. Shanks. Development of Rapid Canine Fecal Source Identification PCR-based Assays. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, 48(19):11453-11461, (2014).

Molina, M., S. Hunter, Mike Cyterski, L. Peed, C. Kelty, Mano Sivaganesan, T. Mooney, L. Prieto, AND O. Shanks. Factors affecting the presence of human-associated and fecal indicator real-time quantitative PCR genetic markers in urban-impacted recreational beaches. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 64:196-208, (2014).

Green, H., Rich Haugland, M. Varma, H. Millen, M. Borchardt, K. Field, W. Walters, R. Knight, Mano Sivaganesan, C. Kelty, AND O. Shanks. Improved HF183 quantitative real-time PCR assay for characterization of human fecal pollution in ambient surface water samples. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 80(10):3086-3094, (2014).

Ervin, J. S., T. L. Russell, B. A. Layton, K. M. Yamahara, D. Wang, L. M. Sassoubre, Y. Cao, C. A. Kelty, Mano Sivaganesan, A. B. Boehm, P. A. Holden, S. B. Weisberg, AND O. C. Shanks. Characterization of fecal concentrations in human and other animal sources by physical, culture-based, and quantitative real-time PCR methods. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 47(18):6873-6882, (2013).

Raith, M. R., C. A. Kelty, J. F. Griffith, A. Schriewer, S. Wuertz, S. Mieszkin, M. Gourmelon, G. H. Reischer, A. H. Farnleitner, J. S. Ervin, P. A. Holden, D. L. Ebentier, J. A. Jay, D. Wang, A. B. Boehm, T. Gim Aw, J. B. Rose, E. Balleste, W. G. Meijer, Mano Sivaganesan, AND O. C. Shanks. Comparison of PCR and quantitative real-time PCR methods for the characterization of ruminant and cattle fecal pollution sources . WATER RESEARCH. Elsevier Science Ltd, New York, NY, 47(18):6921-6928, (2013).

Shanks, O. C., R. J. Newton, C. A. Kelty, S. M. Huse, M. L. Sogin, AND S. L. McLellan. Comparison of the Microbial Community Structures of Untreated Wastewaters from Different Geographic Locales. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 79(9):2906-2913, (2013).

Ebentier, D., K. Hanley, Y. Cao, B. Badgley, A. Boehm, J. Ervin, K. Goodwin, M. Gourmelon, J. Griffith, P. Holden, C. Kelty, S. Lozach, C. McGee, L. Peed, M. Raith, H. Ryu, M. Sadowsky, E. Scott, J. Santodomingo, A. Schriewer, C. Sinigalliano, O. Shanks, L. Van De Werfhorst, D. Wang, S. Wuertz, AND J. Jay. Evaluation of the repeatability and reproducibility of a suite of qPCR based microbial source tracking methods. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 47(18):6839–6848, (2013).

Millen, H., S. Spencer, O. Shanks, H. Green, C. Kelty, Rich Haugland, J. Gonnering, AND M. Borchardt. Improved HF183 reverse primer and probe for greater analytical sensitivity of human Bacteroides in the environment. Presented at American Society for Microbiology 2013, Denver, CO, May 18 - 21, 2013.

PEED, L., C. A. KELTY, M. SIVAGANESAN, T. Mooney, C. T. NIETCH, AND O. C. SHANKS. Comparison of Cultural and Molecular Fecal Indicator Measurements in Surface Water and Periphyton Biofilms in Artificial Streams . Presented at American Society of Microbiology 112th General Meeting, San Francisco, CA, June 16 - 19, 2012.

KELTY, C. A., M. SIVAGANESAN, O. C. SHANKS, M. Raith, J. Griffith, A. Schriewer, S. Wuertz, S. Mieszkin, M. Guormelon, G. Reischer, A. Farnleitner, J. Ervin, T. Holden, J. Jay, AND A. Boehm. Comparison of PCR-Based Assays for the Characterization of Cattle Fecal Pollution in California. Presented at American Society of Microbiologist 112th General Meeting, San Francisco, CA, June 16 - 19, 2012.

KELTY, C. A., M. VARMA, M. SIVAGANESAN, R. A. HAUGLAND, AND O. C. SHANKS. Distribution of Genetic Marker Concentrations for Fecal Indicator Bacteria in Sewage and Animal Feces. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 78(12):4225-4232, (2012).

Converse, R., J. Kinzelman, E. Sams, E. Hudgens, A. Dufour, H. Ryu, J. Santo-Domingo, C. Kelty, O. Shanks, S. Siefring, R. Haugland, AND Tim Wade. Dramatic Improvements in Beach Water Quality Following Gull Removal. ENVIRONMENTAL SCIENCE AND TECHNOLOGY. John Wiley & Sons, Ltd., Indianapolis, IN, 48(18):10206-13, (2012).

Peed, L., C. Kelty, Mano Sivaganesan, T. Mooney, C. Nietch, AND O. Shanks. Evidence for Interactions between Surface Water and Periphyton Biofilms in Artificial Streams. Presented at International Society of Microbial Ecology 14, Copenhagen, DENMARK, August 19 - 24, 2012.

SHANKS, O. C., MANO SIVAGANESAN, L. PEED, C. A. KELTY, A. D. Blackwood, M. R. Greene, R. T. Noble, R. N. Bushon, E. A. Stelzer, J. Kinzelman, T. Anan'eva, C. Sinigalliano, D. Wanless, J. Griffith, Y. Cao, S. Weisberg, V. J. Harwood, C. Staley, K. OSHIMA, M. VARMA, AND R. A. HAUGLAND. Interlaboratory Comparison of Real-time PCR Protocols for Quantification of General Fecal Indicator Bacteria. ENVIRONMENTAL SCIENCE AND TECHNOLOGY. ACS Publications, Washington, DC, 46(2):945-953, (2012).

SHANKS, O. C., C. A. KELTY, L. PEED, M. SIVAGANESAN, T. Mooney, M. Jenkins, AND E. VILLEGAS. Age-Related Shifts in the Density and Distribution of Genetic Marker Water Quality Indicators in Cow and Calf Feces. Presented at American Society of Microbiology 111th General Meeting, New Orleans, LA, May 21 - 24, 2011.

PEED, L. A., C. T. NIETCH, C. A. KELTY, M. C. MECKES, T. Mooney, M. SIVAGANESAN, AND O. C. SHANKS. Combining Land Use Information and Small Stream Sampling with PCR-Based Methods for Better Characterization of Diffuse Sources of Human Fecal Pollution . ENVIRONMENTAL SCIENCE AND TECHNOLOGY. ACS Publications, Washington, DC, 45(13):5652-5659, (2011).

SHANKS, O. C., C. A. KELTY, S. Archibeque, M. Jenkins, R. J. Newton, S. L. McLellan, S. M. Huse, AND M. L. Sogin. Community structures of fecal bacteria in cattle from different animal feeding operations . APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 77(9):2992-3001, (2011).

Rogers, S. W., M. Donnelly, L. Peed, C. A. KELTY, S. Mondal, Z. Zhang, AND O. C. SHANKS. Decay Of Bacterial Pathogen, Fecal Indicators, And Real-Time Quantitative PCR Genetic Markers In Manure Amended Soils. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 77(14):4839-4848, (2011).

ROGERS, S. W., M. Donnelly, L. Peed, C. A. KELTY, S. Mondal, Z. Zhong, AND O. C. SHANKS. Decay Of Bacterial Pathogens, Fecal Indicators, And Real-Time Quantitative PCR Genetic Markers In Manure-Amended Soils. H. L. Drake (ed.), APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 77(14):4839-4848, (2011).

MOLINA, M., S. Hunter, E. Duvall, M. J. CYTERSKI, L. PEED, C. A. KELTY, M. SIVAGANESAN, T. Mooney, AND O. C. SHANKS. Assessing the Impact of Urban Runoff in Recreational Beaches in South Carolina and Florida Using Culturable and QPCR Fecal Indicator. Presented at 110th General Meeting of the American Society for Microbiology, San Diego, CA, May 23 - 27, 2010.

SHANKS, O. C., C. A. KELTY, S. M. Huse, M. L. Sogin, R. J. Newton, AND S. L. McLellan. DETERMINATION OF MICROBIAL COMMUNITY STRUCTURE IN UNTREATED WASTEWATER FROM DIFFERENT GEOGRAPHIC LOCALES. Presented at International Society of Microbial Ecology 13th International Meeting, Seattle, WA, August 22 - 27, 2010.

SHANKS, O. C., C. A. KELTY, S. Archibeque, M. Jenkins, S. M. Huse, AND M. L. Sogin. Diversity and Population Structure of Bovine Fecal-Derived Microorganisms from Different Animal Feeding Operations. Presented at American Society for Microbiology 110th General Meeting, San Diego, CA, May 23 - 27, 2010.