Science Inventory

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Haugland, Rich AND S. Briggs. Public notification implications of monitoring Michigan beaches with EPA qPCR methods. Great Lakes Beach and Water Safety Conference, Independence, OH, October 23 - 25, 2018.

Sivaganesan, Mano, M. Varma, S. Siefring, AND Rich Haugland. Quantification of plasmid DNA standards for U.S. EPA fecal indicator bacteria qPCR methods by droplet digital PCR analysis. JOURNAL OF MICROBIOLOGICAL METHODS. Elsevier Science Ltd, New York, NY, 152:135-142, (2018). https://doi.org/10.1016/j.mimet.2018.07.005

Haugland, Rich. U.S. EPA QPCR Methods for Recreational Water Testing. 2018 Michigan Environmental Health Association Education Conference, Pontiac, MI, March 21 - 23, 2018.

Napier, M., Rich Haugland, C. Poole, A. Dufour, J. Stewart, D. Weber, M. Varma, J. Lavender, AND Tim Wade. Exposure to human-associated fecal indicators and self-reported illness among swimmers at recreational beaches: A cohort study. ENVIRONMENTAL HEALTH. Academic Press Incorporated, Orlando, FL, 16(1):103, (2017). https://doi.org/10.1186/s12940-017-0308-3

Shanks, O., C. Kelty, R. Oshiro, Rich Haugland, T. Madi, L. Brooks, K. Field, AND Mano Sivaganesan. Data Acceptance Criteria for Standardized Human-Associated Fecal Source Identification Quantitative Real-Time PCR Methods. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 82(9):2773-2782, (2016).

Paar, J., M. Doolittle, M. Varma, S. Siefring, K. Oshima, AND Rich Haugland. Development and evaluation of a culture-independent method for source determination of fecal wastes in surface and storm waters using reverse transcriptase-PCR detection of FRNA coliphage genogroup gene sequences. JOURNAL OF MICROBIOLOGICAL METHODS. Elsevier Science Ltd, New York, NY, 112(2):28-35, (2015).

Napier, M., C. Poole, Rich Haugland, AND Tim Wade. Exposure to human source fecal indicators and self-reported illness among bathers. UNC Water Microbiology Conference, Chapel Hill, NC, May 18 - 22, 2015.

Sivaganesan, Mano, S. Siefring, M. Varma, AND Rich Haugland. Comparison of Enterococcus quantitative polymerase chain reaction analysis results from midwest U.S. river samples using EPA Method 1611 and Method 1609 PCR reagents. JOURNAL OF MICROBIOLOGICAL METHODS. Elsevier Science Ltd, New York, NY, 101(6):9-17, (2014).

SHANKS, O. C., L. PEED, M. SIVAGANESAN, R. A. HAUGLAND, AND E. C. CHERN. Human fecal source identification with real-time quantitative PCR. 2nd, Chapter 7, Paulsen I., Holmes A. (ed.), Environmental Microbiology, Methods in Molecular Biology Series. Humana Press Incorporated, Totowa, NJ, 1096:85-99, (2014).

Green, H., Rich Haugland, M. Varma, H. Millen, M. Borchardt, K. Field, W. Walters, R. Knight, Mano Sivaganesan, C. Kelty, AND O. Shanks. Improved HF183 quantitative real-time PCR assay for characterization of human fecal pollution in ambient surface water samples. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 80(10):3086-3094, (2014).

Chern, E., K. Brenner, L. Wymer, AND Rich Haugland. Influence of wastewater disinfection on densities of culturable fecal indicator bacteria and genetic markers. JOURNAL OF WATER AND HEALTH. IWA Publishing, London, Uk, 12(3):410-417, (2014).

Haugland, Rich, S. Siefring, M. Varma, A. Dufour, K. Brenner, Tim Wade, E. Sams, S. Cochran, S. Braun, AND Mano Sivaganesan. Standardization of enterococci density estimates by EPA qPCR methods and comparison of beach action value exceedances in river waters with culture methods. JOURNAL OF MICROBIOLOGICAL METHODS. Elsevier Science Ltd, New York, NY, 105(7):59-66, (2014).

Heaney, C., N. Exum, A. Dufour, K. Brenner, Rich Haugland, E. Chern, K. Schwab, D. Love, M. Serre, R. Noble, AND Tim Wade. Water Quality, Weather and Environmental Factors Associated with Fecal Indicator Organism Density in Beach Sand at Two Recreational Marine Beaches. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, Netherlands, 497(11):440-447, (2014).

Cao, Y., M. SIVAGANESAN, J. Kinzelman, A. Blackwood, R. Noble, R. A. HAUGLAND, J. F. Griffith, AND S. B. Weisberg. Effect of platform, reference material, and quantification model on enumeration of Enterococcus by quantitative PCR methods. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 47(1):233-241, (2013).

Millen, H., S. Spencer, O. Shanks, H. Green, C. Kelty, Rich Haugland, J. Gonnering, AND M. Borchardt. Improved HF183 reverse primer and probe for greater analytical sensitivity of human Bacteroides in the environment. Presented at American Society for Microbiology 2013, Denver, CO, May 18 - 21, 2013.

Wade, Tim, E. Sams, Rich Haugland, AND A. Dufour. Overview of Recent Marine and Freshwater Recreational Epidemiology Studies and Their Findings. Presented at WEFTEC, Chicago, IL, October 05 - 09, 2013.

Sivaganesan, Mano, M. Varma, AND Rich Haugland. Comparison of Enterococcus qPCR analysis results from fresh and marine water samples on two real-time instruments - poster. Presented at ISME14, International Society for Microbial Ecology, Copenhagen, DENMARK, August 19 - 24, 2012.

SIVAGANESAN, M., M. VARMA, AND R. A. HAUGLAND. Comparison of Enterococcus qPCR analysis results from fresh and marine waters on two real-tme instruments. ANALYTICAL BIOCHEMISTRY. Academic Press Incorporated, Orlando, FL, 430(1):68-74, (2012).

Converse, R. R., J. F. Griffith, R. T. Noble, R. A. HAUGLAND, K. C. Schiff, AND S. B. Weisberg. Correlation between quantitative PCR and Culture-Based methods for measuring Enterococcus spp. over various temporal scales at three California marine beaches. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 78(4):1237-1242, (2012).

Haugland, Rich, M. Varma, AND L. Wymer. Detection and quantification limits of the EPA Enterococcus qPCR method. 12th Annual Great Lakes Beach Asssociation Conference, Mackinac Island, MI, October 16 - 18, 2012.

KELTY, C. A., M. VARMA, M. SIVAGANESAN, R. A. HAUGLAND, AND O. C. SHANKS. Distribution of Genetic Marker Concentrations for Fecal Indicator Bacteria in Sewage and Animal Feces. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 78(12):4225-4232, (2012).

Converse, R., J. Kinzelman, E. Sams, E. Hudgens, A. Dufour, H. Ryu, J. Santo-Domingo, C. Kelty, O. Shanks, S. Siefring, R. Haugland, AND Tim Wade. Dramatic Improvements in Beach Water Quality Following Gull Removal. ENVIRONMENTAL SCIENCE AND TECHNOLOGY. John Wiley & Sons, Ltd., Indianapolis, IN, 48(18):10206-13, (2012).

Heaney, C. D., E. A. SAMS, A. P. DUFOUR, K. P. BRENNER, R. A. HAUGLAND, E. C. CHERN, S. Wing, S. Marshall, D. C. Love, M. Serre, R. Noble, AND T. J. WADE. Fecal indicators in sand, sand contact, and risk of enteric illness among beach-goers. EPIDEMIOLOGY. Lippincott Williams & Wilkins, Philadelphia, PA, 23(1):95-106, (2012).

HAUGLAND, R. A., S. SIEFRING, J. Lavender, AND M. VARMA. Influences of sample interference and interference controls on quantification of enterococci fecal indicator bacteria in surface water samples by the qPCR method. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 46(18):5989-6001, (2012).

SHANKS, O. C., MANO SIVAGANESAN, L. PEED, C. A. KELTY, A. D. Blackwood, M. R. Greene, R. T. Noble, R. N. Bushon, E. A. Stelzer, J. Kinzelman, T. Anan'eva, C. Sinigalliano, D. Wanless, J. Griffith, Y. Cao, S. Weisberg, V. J. Harwood, C. Staley, K. OSHIMA, M. VARMA, AND R. A. HAUGLAND. Interlaboratory Comparison of Real-time PCR Protocols for Quantification of General Fecal Indicator Bacteria. ENVIRONMENTAL SCIENCE AND TECHNOLOGY. ACS Publications, Washington, DC, 46(2):945-953, (2012).