TY  - Abstract
A1  - Bilbao, A 
A1  - Gibbons, B 
A1  - Stow, S 
A1  - Kyle, J 
A1  - Bloodsworth, K 
A1  - Payne, S 
A1  - Smith, R 
A1  - Ibrahim, Y 
A1  - Baker, E 
A1  - Fjeldsted, J 
T1  - A Preprocessing Tool for Enhanced Ion Mobility-Mass Spectrometry-Based Omics Workflows.
Y1  - 2021/08/12
N1  - R840032
JF  - JOURNAL OF PROTEOME RESEARCH
VL  - 21
IS  - 3
SP  - 798
EP  - 807
ER  - 


TY  - Abstract
A1  - Butler, K 
A1  - Baker, E 
T1  - A High-Throughput Ion Mobility Spectrometry-Mass Spectrometry Screening Method for Opioid Profiling.
Y1  - 2022/09/22
N1  - R840032
JF  - JOURNAL OF THE AMERICAN SOCIETY OF MASS SPECTROMETRY
VL  - 23
IS  - 10
SP  - 1904
EP  - 1913
ER  - 


TY  - Abstract
A1  - Witchey, S 
A1  - Doyle, M 
A1  - Fredenburg, J 
A1  - St., A 
A1  - Horman, B 
A1  - Odenkirk, M 
A1  - Aulor, D 
A1  - Baker, E 
A1  - Patisaul, H 
T1  - Impacts of Gestational FireMaster 550 (FM 550) Exposure on the Neonatal Cortex are Sex Specific and Largely Attributable to the Organophosphate Esters.
Y1  - 2022/09/08
N1  - R840032
JF  - NEUROINDOCRINOLOGY
VL  - 10
IS  - 1159
ER  - 


TY  - Abstract
T1  - METLIN-CCS:an ion mobility spectrometry collision cross section database.
Y1  - 2023//
N1  - R840032
JF  - NATURE METHODS
VL  - 20
IS  - 12
SP  - 1836
EP  - 1837.
ER  - 


TY  - Abstract
T1  - METLIN-CCS lipid database:an authentic standards resource for lipid classification and identification.
N1  - R840032
JF  - NATURE METABOLISM
ER  - 


TY  - JOUR
A1  - Aly, N 
A1  - Dodds, J 
A1  - Luo, Y 
A1  - Grimm, F 
A1  - Foster, M 
A1  - Rusyn, I 
A1  - Baker, E 
T1  - Utilizing ion mobility spectrometry-mass spectrometry for the characterization and detection of persistent organic pollutants and their metabolites.
Y1  - 2021/10/20
N1  - R840032
JF  - ANALYTICAL AND BIOANALYTICAL CHEMISTRY
VL  - 414
IS  - 3
SP  - 1245
EP  - 1258
ER  - 


TY  - JOUR
A1  - Baker, E 
A1  - Hoang, C 
A1  - Uritboonthai, W 
A1  - Heyman, H 
A1  - Pratt, B 
A1  - MacCross, M 
A1  - MacLean, B 
A1  - Plumb, R 
A1  - Aisporna, A 
A1  - Siuzdak, G 
T1  - METLIN-CCS: an ion mobility spectrometry collision cross section database
Y1  - 2023//06
N1  - R840032
JF  - NATURE METHODS
SP  - 1
EP  - 2
ER  - 


TY  - JOUR
A1  - Boatman, A 
A1  - Chappel, J 
A1  - Polera, M 
A1  - Dodds, J 
A1  - Belcher, S 
A1  - Baker, E 
T1  - Assessing Per- and Polyfluoroalkyl Substances in Fish Fillet Using Non-Targeted Analyses
Y1  - 2024/08/05
N1  - R840032
JF  - ENVIRONMENTAL SCIENCE & TECHNOLOGY
J1  - ENVIRON SCI TECHNOL
J2  - Enviornmenal Research
J3  - ENVIRONMENTAL SCIENCE & TECHNOLOGY
ER  - 


TY  - JOUR
A1  - Chappel, J 
A1  - King, M 
A1  - Fleming, J 
A1  - Eberlin, L 
A1  - Reif, D 
A1  - Baker, E 
T1  - Aggregated Molecular Phenotype Scores: Enhancing Assessment and Visualization of Mass Spectrometry Imaging Data for Tissue-Based Diagnostics
Y1  - 2023/08/14
N1  - R840032
JF  - ANALYTICAL CHEMISTRY
J1  - ANAL CHEM
J2  - Analytical Chemistry
VL  - Online ahead of print
ER  - 


TY  - JOUR
A1  - Chappel, J 
A1  - Kirkwood-Donelson, K 
A1  - Reif, D 
A1  - Baker, E 
T1  - From big data to big insights: statistical and bioinformatic approaches for exploring the lipidome
Y1  - 2023/10/01
N1  - R840032
JF  - ANALYTICAL AND BIOANALYTICAL CHEMISTRY
ER  - 


TY  - JOUR
A1  - Chappel, J 
A1  - Kirkwood-Donelson, K 
A1  - Dodds, J 
A1  - Fleming, J 
A1  - Reif, D 
A1  - Baker, E 
T1  - Streamlining Phenotype Classification and Highlighting Feature Candidates: A Screening Method for Non-Targeted Ion Mobility Spectrometry-Mass Spectrometry (IMS-MS) Data
Y1  - 2024/09/01
N1  - R840032
JF  - ANALYTICAL CHEMISTRY
J1  - ANAL CHEM
J2  - Analytical Chemistry
ER  - 


TY  - JOUR
A1  - Dodds, J 
A1  - Baker, E 
T1  - Improving the Speed and Selectivity of Newborn Screening Using Ion Mobility Spectrometry–Mass Spectrometry
Y1  - 2021/12/01
N1  - R840032
JF  - ANALYTICAL CHEMISTRY
J1  - ANAL CHEM
J2  - Analytical Chemistry
VL  - 93
IS  - 51
SP  - 17094
EP  - 17102
ER  - 


TY  - JOUR
A1  - Dodds, J 
A1  - Kirkwood-Donelson, K 
A1  - Boatman, A 
A1  - Knappe, D 
A1  - Hall, N 
A1  - Schnetzer, A 
A1  - Baker, E 
T1  - Evaluating Solid Phase Adsorption Toxin Tracking (SPATT) for passive monitoring of per- and polyfluoroalkyl substances (PFAS) with Ion Mobility Spectrometry-Mass Spectrometry (IMS-MS)
Y1  - 2024//15
N1  - R840032
JF  - SCIENCE OF THE TOTAL ENVIRONMENT
J1  - SCI TOTAL ENVIRON
VL  - 947
ER  - 


TY  - JOUR
A1  - Foley, M 
A1  - Walker, M 
A1  - Stewart, A 
A1  - O'Flaherty, S 
A1  - Gentry, E 
A1  - Patel, S 
A1  - Beaty, V 
A1  - Allen, G 
A1  - Pan, M 
A1  - Simpson, J 
A1  - Perkins, C 
A1  - Vanoy, M 
A1  - Doughtery, M 
A1  - McGill, S 
A1  - Gulati, A 
A1  - Dorrenstein, P 
A1  - Baker, E 
A1  - Redinbo, M 
A1  - Barrangou, R 
A1  - Theriot, C 
T1  - Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut.
Y1  - 2023/03/13
N1  - R840032
JF  - NATURE MICROBIOLOGY
VL  - 8
IS  - 4
SP  - 611
EP  - 628
ER  - 


TY  - JOUR
A1  - Foster, M 
A1  - Rainey, M 
A1  - Watson, C 
A1  - Dodds, J 
A1  - Kirkwood, K 
A1  - Fernandez, F 
A1  - Baker, E 
T1  - Uncovering PFAS and Other Xenobiotics in the Dark Metabolome Using Ion Mobility Spectrometry, Mass Defect Analysis, and Machine Learning.
Y1  - 2022/06/02
N1  - R840032
JF  - ENVIRONMENTAL SCIENCE & TECHNOLOGY
J1  - ENVIRON SCI TECHNOL
J2  - Enviornmenal Research
J3  - ENVIRONMENTAL SCIENCE & TECHNOLOGY
VL  - 56
IS  - 12
SP  - 9133
EP  - 9143
ER  - 


TY  - JOUR
A1  - Kirkwood, K 
A1  - Fleming, J 
A1  - Nguyn, F 
A1  - Reif, D 
A1  - Baker, E 
A1  - Belcher, S 
T1  - Utilizing Pine Needles to Temporally and Spatially Profile Per- and Polyfluoroalkyl Substances (PFAS)
Y1  - 2022/02/14
N1  - R840032
JF  - ENVIRONMENTAL SCIENCE & TECHNOLOGY
J1  - ENVIRON SCI TECHNOL
J2  - Enviornmenal Research
J3  - ENVIRONMENTAL SCIENCE & TECHNOLOGY
VL  - 56
IS  - 6
SP  - 3441
EP  - 3451
ER  - 


TY  - JOUR
A1  - Lin, H 
A1  - Chiu, W 
T1  - Development of a Physiologically Based Gut Absorption Model for Probabilistic Prediction of Environmental Chemical Bioavailability
Y1  - 2023/08/01
N1  - R840032
JF  - ALTEX-ALTERNATIVES TO ANIMAL EXPERIMENTATION
J1  - Altex-Alternatives to Animal Experimentation
VL  - 40
IS  - 3
SP  - 471
EP  - 484
ER  - 


TY  - JOUR
A1  - Mirfazaelian, A 
A1  - Kim, K 
A1  - Anand, S S
A1  - Kim, H J
A1  - Tornero-Velez, R 
A1  - Bruckner, J V
A1  - Fisher, J W
T1  - Development of a physiologically based pharmacokinetic model for deltamethrin in the adult male Sprague-Dawley rat.
Y1  - 2006/10/01
N1  - R830800
N1  - R840032
VL  - 93
IS  - 2
SP  - 432
EP  - 442
ER  - 


TY  - JOUR
A1  - Odenkirk, M 
A1  - Zheng, X 
A1  - Kyle, J 
A1  - Stratton, K 
A1  - Niorca, C 
A1  - Bloodsworth, K 
A1  - Mclean, C 
A1  - Masters, C 
A1  - Monroe, M 
A1  - Doecke, J 
A1  - Smith, R 
A1  - Burnum-Johnson, K 
A1  - Roberts, B 
A1  - Baker, E 
T1  - Deciphering ApoE Genotype-Driven Proteomic and Lipidomic Alterations in Alzheimer's Disease Across Distinct Brain Regions
Y1  - 2024/01/18
N1  - R840032
JF  - JOURNAL OF PROTEOME RESEARCH
ER  - 


TY  - JOUR
A1  - Sakolish, C 
A1  - Reese, C E
A1  - Luo, Y S
A1  - Valdiviezo, A 
A1  - Schurdak, M E
A1  - Gough, A 
A1  - Taylor, D L
A1  - Chiu, W A
A1  - Venetti, L A
A1  - Rusyn, I 
T1  - Analysis of reproducibility and robustness of a human microfluidic four-cell liver acinus microphysiology system (LAMPS)
Y1  - 2021//30
N1  - R835736
N1  - R840032
VL  - 448
SP  - 152651.
ER  - 


TY  - JOUR
A1  - Solosky, A 
A1  - Claudio, I 
A1  - Chapel, J 
A1  - Kirkwood-Donelson, K 
A1  - Janech, M 
A1  - Bland, A 
A1  - Gulland, F 
A1  - Neely, B 
A1  - Baker, E 
T1  - Proteomic and Lipidomic Plasma Evaluations Reveal Biomarkers for Domoic Acid Toxicosis in California Sea Lions
Y1  - 2024/01/11
N1  - R840032
JF  - JOURNAL OF PROTEOME RESEARCH
VL  - 23
IS  - 12
SP  - 5577
EP  - 5585
ER  - 


TY  - JOUR
A1  - Stewart, A K
A1  - Foley, M H
A1  - Doughetry, M K
T1  - McGill, SK, Gulati AS, Gentry EC, Hagey LR, Dorrenstein PC, Theirot CM, Dodds JN, Baker ES.
Y1  - 2023//
N1  - R840032
JF  - ANALYTICAL CHEMISTRY
J1  - ANAL CHEM
J2  - Analytical Chemistry
VL  - 95
IS  - 41
SP  - 15357
EP  - 15366
ER  - 


TY  - JOUR
T1  - From Pesticides to Per-and Polyfluoroalkyl Substances:An Evaluation of Recent Targeted and Untargeted Mass Spectrometry Methods for Xenobiotics.
Y1  - 2020//
N1  - R840032
JF  - ANALYTICAL CHEMISTRY
J1  - ANAL CHEM
J2  - Analytical Chemistry
VL  - 93
IS  - 1
SP  - 641
EP  - 56.
ER  - 


TY  - JOUR
T1  - Multiomic Big Data Analysis Challenges:Increasing Confidence in the Interpretation of Artificial Intelligence Assessments.
Y1  - 2021/05/24
N1  - R840032
VL  - 93
IS  - 22
SP  - 7763
EP  - 7773
ER  - 


TY  - JOUR
T1  - Aggregated molecular phenotype scores:enhancing assessment and visualization of mass spectrometry imaging data for tissue-based diagnostics.
Y1  - 2023//
N1  - R840032
JF  - ANALYTICAL CHEMISTRY
J1  - ANAL CHEM
J2  - Analytical Chemistry
VL  - 95
IS  - 34
SP  - 12913
EP  - 12922.
ER  - 


TY  - JOUR
T1  - Analysis of reproducibility and robustness of a renal proximal tubule microphysiological system OrganoPlate 3-lane 40 for in vitro studies of drug transport and toxicity.
Y1  - 2023//
N1  - R840032
JF  - TOXICOLOGICAL SCIENCES
J1  - TOXICOL SCI
J2  - Toxicol.Sci.
J3  - Toxicological Sciences
VL  - 196
IS  - 1
SP  - 52
EP  - 70.
ER  - 


TY  - JOUR
T1  - Reproducibility and robustness of a liver microphysiological system PhysioMimix LC12 under varying culture conditions and cell type combinations.
Y1  - 2023//
N1  - R840032
JF  - BIOENGINEERING
VL  - 10
IS  - 10
SP  - 1195.
ER  - 


TY  - JOUR
T1  - Uncovering per-and polyfluoroalkyl substances (PFAS) with nontargeted ion mobility spectrometry–mass spectrometry analyses.
Y1  - 2023//
N1  - R840032
JF  - SCIENCE ADVANCES
J1  - SCIENCE ADVANCES
VL  - 9
IS  - 43
SP  - eadj7048.
ER  - 


TY  - JOUR
T1  - Using multidimensional separations to distinguish isomeric amino acid–bile acid conjugates and assess their presence and perturbations in model systems.
Y1  - 2023//
N1  - R840032
JF  - ANALYTICAL CHEMISTRY
J1  - ANAL CHEM
J2  - Analytical Chemistry
VL  - 95
IS  - 41
SP  - 15357
EP  - 15366.
ER  - 


TY  - JOUR
T1  - An in vitro-in silico workflow for predicting renal clearance of PFAS.
Y1  - 2024//
N1  - R840032
JF  - TOXICOLOGY AND APPLIED PHARMACOLOGY
J1  - TOXICOL APPL PHARM
J2  - Toxicol.Appl.Pharmacol.
J3  - Toxicol Appl Pharmacol
J4  - Toxicology and Applied Pharmacology
VL  - 489
SP  - 117015.
ER  - 


TY  - JOUR
T1  - Endocrine-disrupting compounds and their impact on human placental function:evidence from placenta organ-on-chip studies.
Y1  - 2024//
N1  - R840032
JF  - LAB ON A CHIP
J1  - LAB ON A CHIP
VL  - 24
IS  - 6
SP  - 1727
EP  - 1749.
ER  - 


TY  - JOUR
T1  - From big data to big insights:statistical and bioinformatic approaches for exploring the lipidome.
Y1  - 2024//
N1  - R840032
JF  - ANALYTICAL AND BIOANALYTICAL CHEMISTRY
VL  - 416
IS  - 9
SP  - 2189
EP  - 2202.
ER  - 


TY  - JOUR
T1  - Investigating mouse hepatic lipidome dysregulation following exposure to emerging per-and polyfluoroalkyl substances (PFAS).
Y1  - 2024//
N1  - R840032
JF  - CHEMOSPHERE
J1  - CHEMOSPHERE
VL  - 354
SP  - 141654.
ER  - 


TY  - JOUR
T1  - Comparative analysis of the physiological and transport functions of various sources of renal proximal tubule cells under static and fluidic conditions in PhysioMimix T12 platform.
N1  - R840032
JF  - DRUG METABOLISM AND DISPOSITION
J1  - DRUG METAB DISPOS
ER  - 


TY  - JOUR
T1  - Editorial overview of the special issue on application of tissue chips in toxicology.
N1  - R840032
JF  - TOXICOLOGY
J1  - TOXICOLOGY
ER  - 


TY  - JOUR
T1  - Recent additions and access to a multidimensional lipidomic database containing liquid chromatography, ion mobility spectrometry, and tandem mass spectrometry information.
N1  - R840032
JF  - ANALYTICAL AND BIOANALYTICAL CHEMISTRY
ER  - 


TY  - CONF
T1  - IMS now and tomorrow.
N1  - R840032
ER  - 


TY  - CONF
T1  - Linking chemical exposure to human health with novel multidimensional analyses and informatics approaches.
N1  - R840032
ER  - 


TY  - CONF
T1  - Microphysiological systems:TEX-VAL Consortium's experience with evaluating academic and commercial tissue chips.
N1  - R840032
ER  - 


TY  - CONF
T1  - Multidimensional non-targeted screening and size-dependent fragmentation.
N1  - R840032
ER  -