Grantee Research Project Results
Publications Details for Grant Number R828676C003
Pacific Estuarine Ecosystem Indicator Research (PEEIR) Consortium: Biogeochemistry and Bioavailability Component
RFA:
Environmental Indicators in the Estuarine Environment Research Program (2000)
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Reference Type | Reference Title | Journal | Author | Citation | Progress Report Year | Document Sources |
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Book Chapter | Trematode parasites as estuarine indicators: opportunities, applications, and comparisons with conventional community approaches. | None | Huspeni TC, Hechinger RF, Lafferty KD | Huspeni TC, Hechinger RF, Lafferty KD. Trematode parasites as estuarine indicators:opportunities, applications, and comparisons with conventional community approaches. In: Bortone SA, ed. Estuarine Indicators. Boca Raton, FL: CRC Press, 2004, Chapter 19, pp. 297-314. |
R828676 (Final) R828676C001 (2004) R828676C003 (Final) |
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Dissertation/Thesis | Biomarkers of cadmium exposure in the wetland plant Spartina foliosa: a laboratory experiment with field validation. | None | Norris SA | Norris SA. Biomarkers of cadmium exposure in the wetland plant Spartina foliosa: a laboratory experiment with field validation. M.S. Thesis. Department of Soils and Biogeochemistry, University of California-Davis, Davis, CA, 2005. |
R828676 (Final) R828676C003 (Final) |
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Journal Article | Diversity, composition, and geographical distribution of microbial communities in California salt marsh sediments. | APPLIED AND ENVIRONMENTAL MICROBIOLOGY | Corrdova-Kreylos AL, Cao Y, Green PG, Hwang H-M, Kuivila KM, LaMontagne MG, Van De Werfhorst LC, Holden PA, Scow KM | Cordova-Kreylos AL, Cao Y, Green PG, Hwang H-M, Kuivila KM, LaMontagne MG, Van De Werfhorst LC, Holden PA, Scow KM. Diversity, composition, and geographical distribution of microbial communities in California salt marsh sediments. Applied and Environmental Microbiology 2006;72(5):3357-3366. |
R828676 (Final) R828676C003 (Final) |
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Journal Article | Synthesis and physico-chemical properties of peptides in soil humic substances. | JOURNAL OF PEPTIDE RESEARCH | Fan TW-M, Lane AN, Chekmenev E, Wittebort RJ, Higashi RM | Fan TW-M, Lane AN, Chekmenev E, Wittebort RJ, Higashi RM. Synthesis and physico-chemical properties of peptides in soil humic substances. Journal of Peptide Research 2004;63(3):253-264. |
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Journal Article | An electrophoretic profiling method for thiol-rich phytochelatins and metallothioneins. | PHYTOCHEMICAL ANALYSIS | Fan TW-M, Lane AN, Higashi RM | Fan TW-M, Lane AN, Higashi RM. An electrophoretic profiling method for thiol-rich phytochelatins and metallothioneins. Phytochemical Analysis 2004;15(3):175-183. |
R825960 (Final) R828676C003 (2003) |
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Journal Article | A comparative study of culture-independent, library-independent genotypic methods of fecal source tracking. | JOURNAL OF WATER AND HEALTH | Field KG, Chern EC, Dick LK, Fuhrman J, Griffith J, Holden PA, LaMontagne MG, Le J, Olson B, Simonich MT | Field KG, Chern EC, Dick LK, Fuhrman J, Griffith J, Holden PA, LaMontagne MG, Le J, Olson B, Simonich MT. A comparative study of culture-independent, library-independent genotypic methods of fecal source tracking. Journal of Water and Health 2003;1(4):181-194. |
R827639 (Final) R828676 (Final) R828676C003 (Final) |
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Journal Article | Mercury methylation from unexpected sources: molybdate-inhibited freshwater sediments and an iron-reducing bacterium. | APPLIED AND ENVIRONMENTAL MICROBIOLOGY | Fleming EJ, Mack EE, Green PG, Nelson DC | Fleming EJ, Mack EE, Green PG, Nelson DC. Mercury methylation from unexpected sources: molybdate-inhibited freshwater sediments and an iron-reducing bacterium. Applied and Environmental Microbiology 2006;72(1):457-464. |
R828676C003 (2004) R829388 (Final) R829388C001 (2005) |
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Journal Article | Host diversity begets parasite diversity: bird final hosts and trematodes in snail intermediate hosts. | PROCEEDINGS OF THE ROYAL SOCIETY B: BIOLOGICAL SCIENCES | Hechinger RF, Lafferty KD | Hechinger RF, Lafferty KD. Host diversity begets parasite diversity: bird final hosts and trematodes in snail intermediate hosts. Proceedings of the Royal Society B–Biological Sciences 2005;272(1567):1059-1066. |
R828676 (Final) R828676C001 (2004) R828676C003 (Final) |
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Journal Article | Using larval trematodes that parasitize snails to evaluate a saltmarsh restoration project. | ECOLOGICAL APPLICATIONS | Huspeni TC, Lafferty KD | Huspeni TC, Lafferty KD. Using larval trematodes that parasitize snails to evaluate a saltmarsh restoration project. Ecological Applications 2004;14(3):795-804. |
R828676 (Final) R828676C001 (2002) R828676C003 (Final) |
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Journal Article | Comparison of free-living and particle-associated bacterial communities in a coastal lagoon. | MICROBIAL ECOLOGY | LaMontagne MG, Holden PA | LaMontagne MG, Holden PA. Comparison of free-living and particle-associated bacterial communities in a coastal lagoon. Microbial Ecology 2003;46(2):228-237. |
R828676 (Final) R828676C003 (2003) R828676C003 (Final) |
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Journal Article | Bacterial diversity in marine hydrocarbon seep sediments. | ENVIRONMENTAL MICROBIOLOGY | LaMontagne MG, Leifer I, Bergmann S, Van De Werfhorst LC, Holden PA | LaMontagne MG, Leifer I, Bergmann S, Van De Werfhorst LC, Holden PA. Bacterial diversity in marine hydrocarbon seep sediments. Environmental Microbiology 2004;6(8):799-808. |
R828676 (Final) R828676C003 (2003) R828676C003 (Final) |
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Journal Article | Application of multiple endmember spectral mixture analysis (MESMA) to AVIRIS imagery for coastal salt marsh mapping: a case study in China Camp, CA, USA. | INTERNATIONAL JOURNAL OF REMOTE SENSING | Li L, Ustin SL, Lay M | Li L, Ustin SL, Lay M. Application of multiple endmember spectral mixture analysis (MESMA) to AVIRIS imagery for coastal salt marsh mapping: a case study in China Camp, CA, USA. International Journal of Remote Sensing 2005;26(23):5193-5207. |
R828676 (Final) R828676C003 (Final) |
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Journal Article | Mapping marshland vegetation of San Francisco Bay, California, using hyperspectral data. | INTERNATIONAL JOURNAL OF REMOTE SENSING | Rosso PH, Ustin SL, Hastings A | Rosso PH, Ustin SL, Hastings A. Mapping marshland vegetation of San Francisco Bay, California, using hyperspectral data. International Journal of Remote Sensing 2005;26(23):5169-5191. |
R828676 (Final) R828676C003 (Final) |
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Journal Article | Use of lidar to study changes associated with Spartina invasion in San Francisco Bay marshes. | REMOTE SENSING OF ENVIRONMENT | Rosso PH, Ustin SL, Hastings A | Rosso PH, Ustin SL, Hastings A. Use of lidar to study changes associated with Spartina invasion in San Francisco Bay marshes. Remote Sensing of Environment 2006;100(3):295-306. |
R828676 (Final) R828676C003 (Final) |
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Journal Article | A mechanistic model of runoff-associated fecal coliform fate and transport through a coastal lagoon. | WATER RESEARCH | Steets BM, Holden PA | Steets BM, Holden PA. A mechanistic model of runoff-associated fecal coliform fate and transport through a coastal lagoon. Water Research 2003;37(3):589-608. |
R828676 (Final) R828676C003 (2002) R828676C003 (Final) |
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Presentation | Significance of particle-associated bacterial communities in denitrification in Carpinteria Salt Marsh. | None | Cao Y | Cao Y. Significance of particle-associated bacterial communities in denitrification in Carpinteria Salt Marsh. Presented at the 2004 Mathias Symposium, The University of California Natural Reserve System, Bodega Marine Laboratory, Bodega Bay, CA, February 27-29, 2004. |
R828676C003 (2003) |
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Presentation | 2005 EPS composition of denitrifying biofilms from wild-type and quorum sensing mutants of pseudomonas aeruginosa as a function of nitrate concentration. | None | Cao Y, Holden PA | Cao Y, Holden PA. 2005 EPS composition of denitrifying biofilms from wild-type and quorum sensing mutants of pseudomonas aeruginosa as a function of nitrate concentration. Presented at the Second American Society for Microbiology Conference on Cell-Cell Communication in Bacteria, Banff, Alberta, Canada, July 23-27, 2004. |
R828676C003 (2004) |
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Presentation | Urbanization and coastal water quality: what can molecular fingerprinting tell us? | None | Cao Y, LaMontagne MG, Holden PA | Cao Y, LaMontagne MG, Holden PA. Urbanization and coastal water quality: what can molecular fingerprinting tell us? Presented at the University of California Systemwide Toxic Substances Research and Teaching Program 15th Annual Research Symposium, Long Beach, CA, April 2002. |
R828676C003 (2002) |
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Presentation | Diversity of microbial communities along pollutant gradients in California coastal marshes. | None | Cordova AL, Scow KM | Cordova AL, Scow KM. Diversity of microbial communities along pollutant gradients in California coastal marshes. Presented at the 10th International Symposium on Microbial Ecology, Cancun, Mexico, August 22-27, 2004. |
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Presentation | Effects of ciprofloxacin on microbial communities in marsh sediment. | None | Cordova AL, Scow KM | Cordova AL, Scow KM. Effects of ciprofloxacin on microbial communities in marsh sediment. Presented at the Fourth Society of Environmental Toxicology and Chemistry World Congress, Portland, OR, November 14-18, 2004. |
R828676C003 (2004) |
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Presentation | Fate and effects of ciprofloxacin on estuarine sediments. | None | Cordova AL, Scow KM | Cordova AL, Scow KM. Fate and effects of ciprofloxacin on estuarine sediments. Presented at the National Groundwater Association’s Fourth International Conference of Pharmaceuticals and Endocrine Disruptors in Water, Minneapolis, MN, October 13-15, 2004. |
R828676C003 (2004) |
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Presentation | Characterization of sediment microbial communities using PLFA: microbiology for the environmental chemistry lab. | None | Cordova AL, Scow KM | Cordova AL, Scow KM. Characterization of sediment microbial communities using PLFA: microbiology for the environmental chemistry lab. Presented at the Agricultural and Environmental Chemistry Graduate Group Annual Colloquium, University of California, Davis, CA, February 14-15, 2005. |
R828676C003 (2004) |
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Presentation | XAD efficiency. | None | Curda D, Fan TW, Kuivila K | Curda D, Fan TW, Kuivila K. XAD efficiency. Presented at the 15th Annual Research Symposium, University of California Systemwide Toxic Substances Research and Teaching Program, Long Beach, CA, April 2002. |
R828676C003 (2002) |
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Presentation | Bioavailability of pesticide contaminants in California wetlands. | None | Datta S, Kuivila K | Datta S, Kuivila K. Bioavailability of pesticide contaminants in California wetlands. Poster presented at the 14th Annual NorCal Society of Environmental Toxicology and Chemistry NorCal Meeting, Davis, CA, May 11-12, 2004. |
R828676C003 (2004) |
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Presentation | Determination of diuron and its metabolites in various matrices by solid phase extraction and HPLC-DAD. | None | Datta S, Smith S, Kuivila K | Datta S, Smith S, Kuivila K. Determination of diuron and its metabolites in various matrices by solid phase extraction and HPLC-DAD. Presented at the Fourth Society of Environmental Toxicology and Chemistry World Congress, Portland, OR, November 14-18, 2004. |
R828676C003 (2004) |
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Presentation | Relations of heavy metal sequestration and rhizospheric ligands under different environmental conditions. | None | Fan TW, Higashi RM, Lane AN | Fan TW, Higashi RM, Lane AN. Relations of heavy metal sequestration and rhizospheric ligands under different environmental conditions. Presented at the National Science Foundation Pan-American Advanced Study Institute Workshop, Rio de Janeiro, Brazil, August 2002. |
R828676C003 (2002) |
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Presentation | Metabolomic application of NMR and MS: tools for broad-screening metabolic pathways. | None | Fan TW-M, Higashi RM, Lane AL | Fan TW-M, Higashi RM, Lane AL. Metabolomic application of NMR and MS:tools for broad-screening metabolic pathways. Presented at the 225th National Meeting of the American Chemical Society, New Orleans, LA, March 23-27, 2003. |
R828676C003 (2003) |
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Presentation | Metabolomic applications of NMR and MS: linkage to proteomics and functional genomics. | None | Fan TW-M, Higashi RM | Fan TW-M, Higashi RM. Metabolomic applications of NMR and MS: linkage to proteomics and functional genomics. Presented at the Pittsburg Conference on Analytical Chemistry and Applied Spectroscopy, PITTCON 2003, Orlando, FL, March 9-14, 2003. |
R828676C003 (2003) |
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Presentation | In Vivo & In Vitro application of NMR & mass spectrometry in environmental stress metabolomics. | None | Fan TW-M, Higashi RM, Lane AL | Fan TW-M, Higashi RM, Lane AL. In Vivo & In Vitro application of NMR & mass spectrometry in environmental stress metabolomics. Presented at the NIEHS-organized Metabolic Profiling:Application to Toxicology and Risk Reduction-An International Conference, Research Triangle Park, NC, May 14-15, 2003. |
R828676C003 (2003) |
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Presentation | Approach to regulatory metabolomics. | None | Fan TW-M | Fan TW-M. Approach to regulatory metabolomics. Presented at the National Institute of Environmental Health Sciences, Research Triangle Park, NC, November 2003. |
R828676C003 (2003) |
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Presentation | Mobilization of metals from salt marsh sediments by euryhaline plants. | None | Green PG, Higashi RM, Fan TW | Green PG, Higashi RM, Fan TW. Mobilization of metals from salt marsh sediments by euryhaline plants. Presented at the Annual Meeting of the Society for Environmental Toxicology and Chemistry, November 2002. |
R828676C003 (2002) |
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Presentation | Mobilization of metals from salt marsh sediments by euryhaline plants. | None | Green PG, Higashi RM, Fan TW | Green PG, Higashi RM, Fan TW. Mobilization of metals from salt marsh sediments by euryhaline plants. Presented at the Annual Meeting of the American Society of Limnology and Oceanography, Salt Lake City, UT, February 2003. |
R828676C003 (2002) |
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Presentation | Bio-assay of soil metals mobilized by salt marsh plants. | None | Green PG, Norris AS, Fan TW-M, Vines CA, et al | Green PG, Norris AS, Fan TW-M, Vines CA, et al. Bio-assay of soil metals mobilized by salt marsh plants. Presented at the Fourth Society of Environmental Toxicology and Chemistry World Congress, Portland, OR, November 14-18, 2004. |
R828676C003 (2004) |
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Presentation | Rapid analysis of salt exudates from marsh plants: implications to ecotoxicity and bioavailability. | None | Green PG, Norris AS, Fan TW-M, Vines CA, et al | Green PG, Norris AS, Fan TW-M, Vines CA, et al. Rapid analysis of salt exudates from marsh plants: implications to ecotoxicity and bioavailability. Presented at the Third Biennial CALFED Science Conference, Sacramento, CA, October 4-6, 2004. |
R828676C003 (2004) |
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Presentation | Prospects and perspectives from two decades of metabolite profiling by mass spectrometry. | None | Higashi RM | Higashi RM. Prospects and perspectives from two decades of metabolite profiling by mass spectrometry. Presented at the University of Louisville Chemistry Department Seminar Series, Louisville, KY, February 2003. |
R828676C003 (2003) |
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Presentation | Vascular plant-pollutant relationships in California tidal marshes: implications for ecosystem indicators. | None | Higashi RM, Fan TW-M, Green PG | Higashi RM, Fan TW-M, Green PG. Vascular plant-pollutant relationships in California tidal marshes: implications for ecosystem indicators. Presented at the 24th Annual Meeting of the Society for Environmental Toxicology and Chemistry, Austin, TX, November 8-13, 2003. |
R828676C003 (2003) |
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Presentation | Interplay of tidal marsh plant biogeochemical and landscape ecology with nutrient and contaminant loads. | None | Higashi RM, Ustin SL, Williams SL, Fan TW-M | Higashi RM, Ustin SL, Williams SL, Fan TW-M. Interplay of tidal marsh plant biogeochemical and landscape ecology with nutrient and contaminant loads. Presented at the Fourth Society of Environmental Toxicology and Chemistry World Congress, Portland, OR, November 14-18, 2004. |
R828676C003 (2004) |
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Presentation | Tidal marsh plants as integrators of biogeochemistry, landscape ecology, contaminant mobilization. | None | Higashi RM | Higashi RM. Tidal marsh plants as integrators of biogeochemistry, landscape ecology, contaminant mobilization. Presented at the 4 th Annual EaGLes Meeting, Duluth, MN, September 30-October 1, 2004. |
R828676C003 (2004) |
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Presentation | Briefing on PEEIR. | None | Higashi RM | Higashi RM. Briefing on PEEIR. Presented at the U.S. Environmental Protection Agency Region IX Office, San Francisco, CA, June 2002. |
R828676C003 (2002) |
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Presentation | Bacterial communities as indicators of estuarine ecosystem health and links to watersheds. | None | Holden PA, LaMontagne MG | Holden PA, LaMontagne MG. Bacterial communities as indicators of estuarine ecosystem health and links to watersheds. Presented at the Estuarine Research Federation, Seattle, WA, September 17, 2003. |
R828676C003 (2003) |
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Presentation | Bacterial communities as indicators of estuarine ecosystem health and links to watersheds. | None | Holden PA | Holden PA. Bacterial communities as indicators of estuarine ecosystem health and links to watersheds. Presented at the Coastal and Estuarine Processes Seminar Series, Soil Science Department, University of Maine, Orono, ME, September 5, 2003. |
R828676C003 (2003) |
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Presentation | Microbial community composition and diversity as indicators of salt marsh ecosystem health. | None | Holden PA, LaMontagne MG | Holden PA, LaMontagne MG. Microbial community composition and diversity as indicators of salt marsh ecosystem health. Presented at the Annual Meeting of the American Society of Limnology and Oceanography, Salt Lake City, UT, February 2003. |
R828676C003 (2002) |
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Presentation | Urbanization and coastal water quality: what can molecular fingerprinting tell us? | None | Holden PA, LaMontagne MG | Holden PA, LaMontagne MG. Urbanization and coastal water quality: what can molecular fingerprinting tell us? Presented at the American Society for Limnology and Oceanography, Victoria, BC, Canada, June 2002. |
R828676C003 (2002) |
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Presentation | Pesticides in California wetlands: integrating exposure and effects. | None | Kuivila K, Datta S | Kuivila K, Datta S. Pesticides in California wetlands: integrating exposure and effects. Presented at the Third Biennial CALFED Science Conference, Sacramento, CA, October 4-6, 2004. |
R828676C003 (2004) |
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Presentation | PLFA results. | None | Scow K, Cordova AL | Scow K, Cordova AL. PLFA results. To be presented at the Estuarine Research Foundation Conference in Seattle, WA, September 2003. |
R828676C003 (2002) |
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The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Conclusions drawn by the principal investigators have not been reviewed by the Agency.