Publications Details for:

Pacific Estuarine Ecosystem Indicator Research (PEEIR) Consortium: Biogeochemistry and Bioavailability Component
Grant Number R828676C003
RFA: Environmental Indicators in the Estuarine Environment Research Program (2000)
Book Chapter (1)
Dissertation/Thesis (1)
Journal Article (13)
Presentation (30)
Reference Type Citation Progress Report Year Document Sources
Book Chapter Huspeni TC, Hechinger RF, Lafferty KD. Trematode parasites as estuarine indicators:opportunities, applications, and comparisons with conventional community approaches. In: Bortone SA, ed. Estuarine Indicators. Boca Raton, FL: CRC Press, 2004, Chapter 19, pp. 297-314. R828676 (Final)
R828676C001 (2004)
R828676C003 (Final)
Dissertation/Thesis Norris SA. Biomarkers of cadmium exposure in the wetland plant Spartina foliosa: a laboratory experiment with field validation. M.S. Thesis. Department of Soils and Biogeochemistry, University of California-Davis, Davis, CA, 2005. R828676 (Final)
R828676C003 (Final)
Journal Article Cordova-Kreylos AL, Cao Y, Green PG, Hwang H-M, Kuivila KM, LaMontagne MG, Van De Werfhorst LC, Holden PA, Scow KM. Diversity, composition, and geographical distribution of microbial communities in California salt marsh sediments. Applied and Environmental Microbiology 2006;72(5):3357-3366. R828676 (Final)
R828676C003 (Final)
Journal Article Fan TW-M, Lane AN, Chekmenev E, Wittebort RJ, Higashi RM. Synthesis and physico-chemical properties of peptides in soil humic substances. Journal of Peptide Research 2004;63(3):253-264. R828676 (Final)
R828676C003 (2003)
Journal Article Fan TW-M, Lane AN, Higashi RM. An electrophoretic profiling method for thiol-rich phytochelatins and metallothioneins. Phytochemical Analysis 2004;15(3):175-183. R825960 (Final)
R828676 (Final)
R828676C003 (2003)
Journal Article Field KG, Chern EC, Dick LK, Fuhrman J, Griffith J, Holden PA, LaMontagne MG, Le J, Olson B, Simonich MT. A comparative study of culture-independent, library-independent genotypic methods of fecal source tracking. Journal of Water and Health 2003;1(4):181-194. R827639 (Final)
R828676 (Final)
R828676C003 (Final)
Journal Article Fleming EJ, Mack EE, Green PG, Nelson DC. Mercury methylation from unexpected sources: molybdate-inhibited freshwater sediments and an iron-reducing bacterium. Applied and Environmental Microbiology 2006;72(1):457-464. R828676C003 (2004)
R829388 (Final)
R829388C001 (2005)
Journal Article Hechinger RF, Lafferty KD. Host diversity begets parasite diversity: bird final hosts and trematodes in snail intermediate hosts. Proceedings of the Royal Society B–Biological Sciences 2005;272(1567):1059-1066. R828676 (Final)
R828676C001 (2004)
R828676C003 (Final)
Journal Article Huspeni TC, Lafferty KD. Using larval trematodes that parasitize snails to evaluate a saltmarsh restoration project. Ecological Applications 2004;14(3):795-804. R828676 (Final)
R828676C001 (2002)
R828676C003 (Final)
Journal Article LaMontagne MG, Holden PA. Comparison of free-living and particle-associated bacterial communities in a coastal lagoon. Microbial Ecology 2003;46(2):228-237. R828676 (Final)
R828676C003 (2003)
R828676C003 (Final)
Journal Article LaMontagne MG, Leifer I, Bergmann S, Van De Werfhorst LC, Holden PA. Bacterial diversity in marine hydrocarbon seep sediments. Environmental Microbiology 2004;6(8):799-808. R828676 (Final)
R828676C003 (2003)
R828676C003 (Final)
Journal Article Li L, Ustin SL, Lay M. Application of multiple endmember spectral mixture analysis (MESMA) to AVIRIS imagery for coastal salt marsh mapping: a case study in China Camp, CA, USA. International Journal of Remote Sensing 2005;26(23):5193-5207. R828676 (Final)
R828676C003 (Final)
Journal Article Rosso PH, Ustin SL, Hastings A. Mapping marshland vegetation of San Francisco Bay, California, using hyperspectral data. International Journal of Remote Sensing 2005;26(23):5169-5191. R828676 (Final)
R828676C003 (Final)
Journal Article Rosso PH, Ustin SL, Hastings A. Use of lidar to study changes associated with Spartina invasion in San Francisco Bay marshes. Remote Sensing of Environment 2006;100(3):295-306. R828676 (Final)
R828676C003 (Final)
Journal Article Steets BM, Holden PA. A mechanistic model of runoff-associated fecal coliform fate and transport through a coastal lagoon. Water Research 2003;37(3):589-608. R828676 (Final)
R828676C003 (2002)
R828676C003 (Final)
Presentation Cao Y. Significance of particle-associated bacterial communities in denitrification in Carpinteria Salt Marsh. Presented at the 2004 Mathias Symposium, The University of California Natural Reserve System, Bodega Marine Laboratory, Bodega Bay, CA, February 27-29, 2004. R828676 (Final)
R828676C003 (2003)
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Presentation

Cao Y, Holden PA. 2005 EPS composition of denitrifying biofilms from wild-type and quorum sensing mutants of pseudomonas aeruginosa as a function of nitrate concentration. Presented at the Second American Society for Microbiology Conference on Cell-Cell Communication in Bacteria, Banff, Alberta, Canada, July 23-27, 2004.

R828676C003 (2004)
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Presentation Cao Y, LaMontagne MG, Holden PA. Urbanization and coastal water quality: what can molecular fingerprinting tell us? Presented at the University of California Systemwide Toxic Substances Research and Teaching Program 15th Annual Research Symposium, Long Beach, CA, April 2002. R828676C003 (2002)
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Presentation

Cordova AL, Scow KM. Diversity of microbial communities along pollutant gradients in California coastal marshes. Presented at the 10th International Symposium on Microbial Ecology, Cancun, Mexico, August 22-27, 2004.

R828676C003 (2004)
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Presentation

Cordova AL, Scow KM. Effects of ciprofloxacin on microbial communities in marsh sediment. Presented at the Fourth Society of Environmental Toxicology and Chemistry World Congress, Portland, OR, November 14-18, 2004.

R828676C003 (2004)
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Presentation

Cordova AL, Scow KM. Fate and effects of ciprofloxacin on estuarine sediments. Presented at the National Groundwater Association’s Fourth International Conference of Pharmaceuticals and Endocrine Disruptors in Water, Minneapolis, MN, October 13-15, 2004.

R828676C003 (2004)
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Presentation

Cordova AL, Scow KM. Characterization of sediment microbial communities using PLFA: microbiology for the environmental chemistry lab. Presented at the Agricultural and Environmental Chemistry Graduate Group Annual Colloquium, University of California, Davis, CA, February 14-15, 2005.

R828676C003 (2004)
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Presentation Curda D, Fan TW, Kuivila K. XAD efficiency. Presented at the 15th Annual Research Symposium, University of California Systemwide Toxic Substances Research and Teaching Program, Long Beach, CA, April 2002. R828676C003 (2002)
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Presentation

Datta S, Kuivila K. Bioavailability of pesticide contaminants in California wetlands. Poster presented at the 14th Annual NorCal Society of Environmental Toxicology and Chemistry NorCal Meeting, Davis, CA, May 11-12, 2004.

R828676C003 (2004)
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Presentation

Datta S, Smith S, Kuivila K. Determination of diuron and its metabolites in various matrices by solid phase extraction and HPLC-DAD. Presented at the Fourth Society of Environmental Toxicology and Chemistry World Congress, Portland, OR, November 14-18, 2004.

R828676C003 (2004)
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Presentation Fan TW, Higashi RM, Lane AN. Relations of heavy metal sequestration and rhizospheric ligands under different environmental conditions. Presented at the National Science Foundation Pan-American Advanced Study Institute Workshop, Rio de Janeiro, Brazil, August 2002. R828676C003 (2002)
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Presentation Fan TW-M, Higashi RM, Lane AL. Metabolomic application of NMR and MS:tools for broad-screening metabolic pathways. Presented at the 225th National Meeting of the American Chemical Society, New Orleans, LA, March 23-27, 2003. R828676 (Final)
R828676C003 (2003)
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Presentation Fan TW-M, Higashi RM. Metabolomic applications of NMR and MS: linkage to proteomics and functional genomics. Presented at the Pittsburg Conference on Analytical Chemistry and Applied Spectroscopy, PITTCON 2003, Orlando, FL, March 9-14, 2003. R828676 (Final)
R828676C003 (2003)
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Presentation Fan TW-M, Higashi RM, Lane AL. In Vivo & In Vitro application of NMR & mass spectrometry in environmental stress metabolomics. Presented at the NIEHS-organized Metabolic Profiling:Application to Toxicology and Risk Reduction-An International Conference, Research Triangle Park, NC, May 14-15, 2003. R828676 (Final)
R828676C003 (2003)
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Presentation Fan TW-M. Approach to regulatory metabolomics. Presented at the National Institute of Environmental Health Sciences, Research Triangle Park, NC, November 2003. R828676 (Final)
R828676C003 (2003)
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Presentation Green PG, Higashi RM, Fan TW. Mobilization of metals from salt marsh sediments by euryhaline plants. Presented at the Annual Meeting of the Society for Environmental Toxicology and Chemistry, November 2002. R828676C003 (2002)
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Presentation Green PG, Higashi RM, Fan TW. Mobilization of metals from salt marsh sediments by euryhaline plants. Presented at the Annual Meeting of the American Society of Limnology and Oceanography, Salt Lake City, UT, February 2003. R828676C003 (2002)
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Presentation

Green PG, Norris AS, Fan TW-M, Vines CA, et al. Bio-assay of soil metals mobilized by salt marsh plants. Presented at the Fourth Society of Environmental Toxicology and Chemistry World Congress, Portland, OR, November 14-18, 2004.

R828676C003 (2004)
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Presentation

Green PG, Norris AS, Fan TW-M, Vines CA, et al. Rapid analysis of salt exudates from marsh plants: implications to ecotoxicity and bioavailability. Presented at the Third Biennial CALFED Science Conference, Sacramento, CA, October 4-6, 2004.

R828676C003 (2004)
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Presentation Higashi RM. Prospects and perspectives from two decades of metabolite profiling by mass spectrometry. Presented at the University of Louisville Chemistry Department Seminar Series, Louisville, KY, February 2003. R828676 (Final)
R828676C003 (2003)
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Presentation Higashi RM, Fan TW-M, Green PG. Vascular plant-pollutant relationships in California tidal marshes: implications for ecosystem indicators. Presented at the 24th Annual Meeting of the Society for Environmental Toxicology and Chemistry, Austin, TX, November 8-13, 2003. R828676 (Final)
R828676C003 (2003)
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Presentation

Higashi RM, Ustin SL, Williams SL, Fan TW-M. Interplay of tidal marsh plant biogeochemical and landscape ecology with nutrient and contaminant loads. Presented at the Fourth Society of Environmental Toxicology and Chemistry World Congress, Portland, OR, November 14-18, 2004.

R828676C003 (2004)
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Presentation

Higashi RM. Tidal marsh plants as integrators of biogeochemistry, landscape ecology, contaminant mobilization. Presented at the 4 th Annual EaGLes Meeting, Duluth, MN, September 30-October 1, 2004.

R828676C003 (2004)
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Presentation Higashi RM. Briefing on PEEIR. Presented at the U.S. Environmental Protection Agency Region IX Office, San Francisco, CA, June 2002. R828676C003 (2002)
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Presentation Holden PA, LaMontagne MG. Bacterial communities as indicators of estuarine ecosystem health and links to watersheds. Presented at the Estuarine Research Federation, Seattle, WA, September 17, 2003. R828676 (Final)
R828676C003 (2003)
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Presentation Holden PA. Bacterial communities as indicators of estuarine ecosystem health and links to watersheds. Presented at the Coastal and Estuarine Processes Seminar Series, Soil Science Department, University of Maine, Orono, ME, September 5, 2003. R828676 (Final)
R828676C003 (2003)
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Presentation Holden PA, LaMontagne MG. Microbial community composition and diversity as indicators of salt marsh ecosystem health. Presented at the Annual Meeting of the American Society of Limnology and Oceanography, Salt Lake City, UT, February 2003. R828676C003 (2002)
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Presentation Holden PA, LaMontagne MG. Urbanization and coastal water quality: what can molecular fingerprinting tell us? Presented at the American Society for Limnology and Oceanography, Victoria, BC, Canada, June 2002. R828676C003 (2002)
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Presentation

Kuivila K, Datta S. Pesticides in California wetlands: integrating exposure and effects. Presented at the Third Biennial CALFED Science Conference, Sacramento, CA, October 4-6, 2004.

R828676C003 (2004)
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Presentation Scow K, Cordova AL. PLFA results. To be presented at the Estuarine Research Foundation Conference in Seattle, WA, September 2003. R828676C003 (2002)
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