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Grantee Research Project Results

Journal Publications for Center:

Texas - Indiana Virtual STAR Center

Grant Number R828598

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Journal Article (42)
Publications
Reference Type Reference Title Journal Author Citation Progress Report Year Document Sources
Journal Article Integrating intracellular dynamics using CompuCell3D and BioNetSolver: applications to multiscale modelling of cancer cell growth and invasion. PLOS ONE Andasari V, Roper RT, Swat MH, Chaplain MAJ Andasari V, Roper RT, Swat MH, Chaplain MAJ. Integrating intracellular dynamics using CompuCell3D and BioNetSolver: applications to multiscale modelling of cancer cell growth and invasion. PLoS ONE 2012;7(3):e33726. R835001 (Final)
  • Full-text from PubMed
  • Abstract from PubMed
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  • Full-text: PLoS ONE-Full Text HTML
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  • Other: PLoS ONE-Full Text PDF
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Journal Article Comment on "Evidence for the presence of PCDD/Fs in the environment prior to 1900 and further studies on their temporal trends." ENVIRONMENTAL SCIENCE & TECHNOLOGY Baker JI, Hites RA Baker JI, Hites RA. Comment on "Evidence for the presence of PCDD/Fs in the environment prior to 1900 and further studies on their temporal trends." Environmental Science & Technology 1999;33(1):205. R825377 (1998)
R825377 (Final)
  • Full-text: ACS-Full Text HTML
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  • Abstract: ACS-Abstract
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  • Other: ACS-Full Text PDF
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Journal Article Polychlorinated dibenzo-p-dioxins and dibenzofurans in the remote North Atlantic marine atmosphere. ENVIRONMENTAL SCIENCE & TECHNOLOGY Baker JI, Hites RA Baker JI, Hites RA. Polychlorinated dibenzo-p-dioxins and dibenzofurans in the remote North Atlantic marine atmosphere. Environmental Science & Technology 1999;33(1):14-20. R825377 (1998)
R825377 (Final)
  • Full-text: ACS-Full Text PDF
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  • Abstract: ACS-Abstract
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  • Other: DSS-Full Text HTML
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Journal Article Siskiwit Lake revisited: time trends of polychlorinated dibenzo-p-dioxin and dibenzofuran deposition at Isle Royale, Michigan. Environmental Science and Technology Baker JI, Hites RA Baker JI, Hites RA. Siskiwit Lake revisited: time trends of polychlorinated dibenzo-p-dioxin and dibenzofuran deposition at Isle Royale, Michigan. Environmental Science and Technology 2000;34(14):2887-2891. R825377 (Final)
  • Full-text: ACS-Full Text HTML
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  • Abstract: ACS-Abstract
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  • Other: ACS-Full Text PDF
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Journal Article Polychlorinated dibenzo-p-dioxins and dibenzofurans: Gas phase hydroxyl radical reactions and related atmospheric removal ENVIRONMENTAL SCIENCE & TECHNOLOGY Brubaker Jr. WW, Hites RA Brubaker Jr. WW, Hites RA. Polychlorinated dibenzo-p-dioxins and dibenzofurans:gas phase hydroxyl radical reactions and related atmospheric removal. Environmental Science & Technology 1997;31(6):1805-1810. R825377 (1998)
R825377 (Final)
  • Full-text: ACS-Full Text HTML
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  • Abstract: ACS-Abstract
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  • Other: ACS-Full Text PDF
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Journal Article Gas phase oxidation products of biphenyl and polychlorinated biphenyls ENVIRONMENTAL SCIENCE & TECHNOLOGY Brubaker Jr. WW, Hites RA Brubaker Jr. WW, Hites RA. Gas phase oxidation products of biphenyl and polychlorinated biphenyls. Environmental Science & Technology 1998;32(24):3913-3918. R825377 (1998)
R825377 (Final)
  • Full-text: ACS-Full Text PDF
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  • Abstract: ACS-Abstract
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  • Other: DSS-Full Text PDF
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Journal Article OH reaction kinetics of polycyclic aromatic hydrocarbons and polychlorinated dibenzo-p-dioxins and dibenzofurans. JOURNAL OF PHYSICAL CHEMISTRY A Brubaker Jr. WW, Hites RA Brubaker Jr. WW, Hites RA. OH reaction kinetics of polycyclic aromatic hydrocarbons and polychlorinated dibenzo-p-dioxins and dibenzofurans. Journal of Physical Chemistry A 1998;102(6):915-921. R825377 (1998)
R825377 (Final)
  • Full-text: ACS-Full Text HTML
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  • Abstract: ACS-Abstract
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  • Other: ACS-Full Text PDF
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Journal Article OH reaction kinetics of gas-phase α-and γ-hexachlorocyclohexane and hexachlorobenzene. ENVIRONMENTAL SCIENCE & TECHNOLOGY Brubaker Jr. WW, Hites RA Brubaker Jr. WW, Hites RA. OH reaction kinetics of gas-phase α-and γ-hexachlorocyclohexane and hexachlorobenzene. Environmental Science & Technology 1998;32(6):766-769. R825377 (1998)
R825377 (Final)
  • Full-text: ACS-Full Text PDF
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  • Abstract: ACS-Abstract
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  • Other: DSS-Full Text PDF
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Journal Article Development of cultures capable of reducing perchlorate and nitrate in high salt solutions. WATER RESEARCH Cang Y, Roberts DJ, Clifford DA Cang Y, Roberts DJ, Clifford DA. Development of cultures capable of reducing perchlorate and nitrate in high salt solutions. Water Research 2004;38(14-15):3322-3330. CR831276 (Final)
R831276C017 (2004)
  • Abstract from PubMed
  • Full-text: ScienceDirect - Full Text HTML
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  • Abstract: ScienceDirect - Abstract
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  • Other: ScienceDirect - Full Text PDF
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Journal Article Catalytic steam reforming of chlorocarbons: trichloroethane, trichloroethylene and perchloroethylene. APPLIED CATALYSIS B: ENVIRONMENTAL Coute N, Ortego Jr JD, Richardson JT, Twigg MV Coute N, Ortego Jr JD, Richardson JT, Twigg MV. Catalytic steam reforming of chlorocarbons: trichloroethane, trichloroethylene and perchloroethylene. Applied Catalysis B: Environmental 1998;19(3-4):175-187. R822721C633 (1999)
  • Abstract: Science Direct
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Journal Article Catalytic steam reforming of chlorocarbons: polychlorinated biphenyls (PCBs). APPLIED CATALYSIS B: ENVIRONMENTAL Coute N, Richardson JT Coute N, Richardson JT. Catalytic steam reforming of chlorocarbons:polychlorinated biphenyls (PCBs). Applied Catalysis B: Environmental 2000;26(4):265-273. R826694C633 (Final)
  • Abstract: Science Direct
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Journal Article Steam reforming of chlorocarbons: chlorinated aromatics. APPLIED CATALYSIS B: ENVIRONMENTAL Coute N, Richardson JT Coute N, Richardson JT. Steam reforming of chlorocarbons:chlorinated aromatics. Applied Catalysis B: Environmental 2000;26(3):217-226. R826694C633 (Final)
  • Abstract: Science Direct
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Journal Article Co-development of wetlands soils and benthic invertebrate communities following salt marsh creation. WETLANDS ECOLOGY AND MANAGEMENT Craft CB Craft CB. Co-development of wetlands soils and benthic invertebrate communities following salt marsh creation. Wetlands Ecology and Management 2000;8(2-3):197-207. R826111 (2000)
  • Abstract: SpringerLink Abstract
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Journal Article Soil organic carbon, nitrogen, and phosphorus as indicators of recovery in restored Spartina marshes. ECOLOGICAL RESTORATION Craft CB Craft CB. Soil organic carbon, nitrogen, and phosphorus as indicators of recovery in restored Spartina marshes. Ecological Restoration 2001;19(2):87-91. R826111 (2000)
  • Other: Indiana PDF
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Journal Article Twenty-five years of ecosystem development of constructed Spartina alterniflora (Loisel) marshes. ECOLOGICAL APPLICATIONS Craft C, Reader J, Sacco JN, Broome SW Craft C, Reader J, Sacco JN, Broome SW. Twenty-five years of ecosystem development of constructed Spartina alterniflora (Loisel) marshes. Ecological Applications 1999;9(4):1405-1419. R826111 (1999)
  • Abstract from PubMed
  • Full-text: ESA - Full Text HTML
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  • Other: ESA - Full Text PDF
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Journal Article Fifteen years of vegetation and soil development after brackish-water marsh creation. RESTORATION ECOLOGY Craft C, Broome S, Campbell C Craft C, Broome S, Campbell C. Fifteen years of vegetation and soil development after brackish-water marsh creation. Restoration Ecology 2002;10(2):248-258. R826111 (2000)
  • Abstract: Blackwell-Synergy Abstract
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Journal Article Polybrominated diphenyl ethers in the environment and in people: A meta-analysis of concentrations. ENVIRONMENTAL SCIENCE & TECHNOLOGY Hites RA Hites RA. Polybrominated diphenyl ethers in the environment and in people: A meta-analysis of concentrations. Environmental Science & Technology 2004;38(4):945-956. R830397 (2003)
R830397 (Final)
  • Abstract from PubMed
  • Other: ACS PDF
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Journal Article Brominated flame retardants in the atmosphere of the east-central United States. ENVIRONMENTAL SCIENCE & TECHNOLOGY Hoh E, Hites RA Hoh E, Hites RA. Brominated flame retardants in the atmosphere of the east-central United States. Environmental Science & Technology 2005;39(20):7794-7802. R830395 (Final)
R830397 (Final)
  • Abstract from PubMed
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Journal Article Novel flame retardants, 1.2-bis(2,4,6-tribromophenoxy)ethane and 2,3,4,5,6-pentabromoethylbenzene, in United States' environmental samples. ENVIRONMENTAL SCIENCE & TECHNOLOGY Hoh E, Zhu LY, Hites RA Hoh E, Zhu LY, Hites RA. Novel flame retardants, 1.2-bis(2,4,6-tribromophenoxy)ethane and 2,3,4,5,6-pentabromoethylbenzene, in United States' environmental samples. Environmental Science & Technology 2005;39(8):2472-2477. R830397 (Final)
  • Abstract from PubMed
  • Other: ACS PDF
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Journal Article Catalytic steam reforming of chlorocarbons: catalyst comparisons. APPLIED CATALYSIS B: ENVIRONMENTAL Intarajang K, Richardson JT Intarajang K, Richardson JT. Catalytic steam reforming of chlorocarbons: catalyst comparisons. Applied Catalysis B: Environment 1999;22(1):27-34. R822721C633 (1999)
  • Abstract: Science Direct
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Journal Article CynD, the cyanide dihydratase from Bacillus pumilus: gene cloning and structural studies APPLIED AND ENVIRONMENTAL MICROBIOLOGY Jandhyala DM, Berman, M, Meyers PR, Sewell BT, Willson RC, Benedik MJ Jandhyala DM, Berman, M, Meyers PR, Sewell BT, Willson RC, Benedik MJ. CynD, the cyanide dihydratase from Bacillus pumilus:gene cloning and structural studies. Applied and Environmental Microbiology 2003;69(8):4794-4805. R828598 (Final)
R828598C789 (Final)
  • Full-text from PubMed
  • Abstract from PubMed
  • Associated PubMed link
  • Full-text: Applied and Environmental Microbiology-Full Text HTML
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  • Abstract: Applied and Environmental Microbiology-Abstract
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  • Other: Applied and Environmental Microbiology-Full Text PDF
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Journal Article Comparison of cyanide-degrading nitrilases. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY Jandhyala DM, Willson RC, Sewell TB, Benedik MJ Jandhyala DM, Willson RC, Sewell BT, Benedik MJ. Comparison of cyanide-degrading nitrilases. Applied Microbiology and Biotechnology 2005;68(3):327-335. R828598 (Final)
R828598C789 (Final)
  • Abstract from PubMed
  • Abstract: Springerlink
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Journal Article Carbon sequestration and nutrient (nitrogen, phosphorus) accumulation in river-dominated tidal marshes, Georgia, USA. None Loomis MJ, Craft CB Loomis MJ, Craft CB. Carbon sequestration and nutrient (nitrogen, phosphorus) accumulation in river-dominated tidal marshes, Georgia, USA. Soil Science Society of America Journal 2010;74(3):1028-1036. R826111 (Final)
R832220 (Final)
  • Full-text: Soil Science Society of America-Full Text HTML
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  • Other: Indiana University-PDF
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Journal Article Polybrominated diphenyl ethers in maternal and fetal blood samples. ENVIRONMENTAL HEALTH PERSPECTIVES Mazdai A, Dodder NG, Abernathy MP, Hites RA, Bigsby RM Mazdai A, Dodder NG, Abernathy MP, Hites RA, Bigsby RM. Polybrominated diphenyl ethers in maternal and fetal blood samples. Environmental Health Perspectives 2003;111(9):1249-1252. R830397 (2003)
R830397 (Final)
  • Abstract from PubMed
  • Full-text: Environmental Health Perspectives Full Text
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  • Other: Environmental Health Perspectives PDF
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Journal Article Catalytic steam reforming of chlorocarbons: catalyst deactivation. APPLIED CATALYSIS B: ENVIRONMENTAL McMinn TE, Moates FC, Richardson JT McMinn TE, Moates FC, Richardson JT. Catalytic steam reforming of chlorocarbons:catalyst deactivation. Applied Catalysis B: Environmental 2001;31(2):93-105. R826694C633 (Final)
  • Abstract: Science Direct
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Journal Article Radial reactor for trichloroethylene steam reforming. AICHE JOURNAL Moates FC, McMinn TE, Richardson JT Moates FC, McMinn TE, Richardson JT. Radial reactor for trichloroethylene steam reforming. AIChE Journal 1999;45(11):2411-2418. R822721C633 (1999)
not available
Journal Article Importance of nonequilibrium sorption conditions: contaminated soil. GROUND WATER MONITORING AND REMEDIATION Opdyke DR, Loehr RC Opdyke DR, Loehr RC. Importance of nonequilibrium sorption conditions: contaminated soil. Ground Water Monitoring & Remediation 2002;22(3):136-143. R828598 (Final)
R828598C725 (Final)
  • Abstract: Wiley InterScience
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Journal Article Transport of subsurface chemicals under nonequilibrium sorption conditions. PRACTICE PERIODICAL OF HAZARDOUS, TOXIC AND RADIOACTIVE WASTE MANAGEMENT Opdyke DR, Loehr RC Opdyke DR, Loehr RC. Transport of subsurface chemicals under nonequilibrium sorption conditions. Practice Periodical of Hazardous, Toxic, and Radioactive Waste Management 2002;6(1):41-48. R828598 (Final)
R828598C725 (Final)
  • Abstract: ASCE
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Journal Article Catalytic steam reforming of chlorocarbons: methyl chloride APPLIED CATALYSIS B: ENVIRONMENTAL Ortego Jr JD, Richardson JT, Twigg MV Ortego Jr JD, Richardson JT, Twigg MV. Catalytic steam reforming of chlorocarbons: methyl chloride. Applied Catalysis B: Environmental 1997;12(4):339-355. R822721C633 (1999)
  • Abstract: Science Direct
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Journal Article Toward modular biological models: defining analog modules based on referent physiological mechanisms. None Petersen BK, Ropella G, Hunt CA Petersen BK, Ropella G, Hunt CA. Toward modular biological models: defining analog modules based on referent physiological mechanisms. BMC Systems Biology 2014;8:95. R835001 (Final)
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  • Abstract from PubMed
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  • Other: Springer-Full Text PDF
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Journal Article The cyanide degrading nitrilase from Pseudomonas stutzeri AK61 is a two-fold symmetric, 14-subunit spiral. STRUCTURE Sewell BT, Berman MN, Meyers PR, Jandhyala D, Benedik MJ Sewell BT, Berman MN, Meyers PR, Jandhyala D, Benedik MJ. The cyanide degrading nitrilase from Pseudomonas stutzeri AK61 is a two-fold symmetric, 14-subunit spiral. Structure 2003;11(11):1413-1422. R828598 (Final)
R828598C789 (Final)
  • Abstract from PubMed
  • Full-text: Science Direct HTML
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  • Abstract: Structure
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Journal Article Infrastructure requirements for moving multiscale modeling from research tools to the clinical and regulatory domains. None Sluka JP, Glazier JA, Swat M Sluka JP, Glazier JA, Swat M. Infrastructure requirements for moving multiscale modeling from research tools to the clinical and regulatory domains. VPH NoE Newsletter 2012;7:12. R835001 (Final)
  • Full-text: COPD-Full Text PDF
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Journal Article The Cell Behavior Ontology: describing the intrinsic biological behaviors of real and model cells seen as active agents. None Sluka J, Shirinifard A, Swat M, Cosmanescu A, Heiland RW, Glazier J Sluka J, Shirinifard A, Swat M, Cosmanescu A, Heiland RW, Glazier J. The Cell Behavior Ontology: describing the intrinsic biological behaviors of real and model cells seen as active agents. Bioinformatics 2014;30(16):2367-2374. R835001 (Final)
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  • Abstract: Oxford Journals-Abstract
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Journal Article Enhanced solubility and biodegradation of naphthalene with biosurfactant JOURNAL OF ENVIRONMENTAL ENGINEERING Vipulanandan C, Ren X Vipulanandan C, Ren X. Enhanced solubility and biodegradation of naphthalene with biosurfactant. Journal of Environmental Engineering 2000;126(7):629-634. R826694C625 (Final)
  • Abstract: ASCE
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Journal Article Toxicokinetic triage for environmental chemicals. TOXICOLOGICAL SCIENCES Wambaugh JF, Wetmore BA, Pearce R, Strope C, Goldsmith R, Sluka JP, Sedykh A, Tropsha A, Bosgra S, Shah I, Judson R, Thomas RS, Setzer RW Wambaugh JF, Wetmore BA, Pearce R, Strope C, Goldsmith R, Sluka JP, Sedykh A, Tropsha A, Bosgra S, Shah I, Judson R, Thomas RS, Setzer RW. Toxicokinetic triage for environmental chemicals. Toxicological Sciences 2015;147(1):55-67. R835001 (Final)
R835166 (2015)
R835166 (2016)
R835166 (Final)
  • Full-text from PubMed
  • Abstract from PubMed
  • Associated PubMed link
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  • Abstract: Oxford-Abstract and Full Text
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Journal Article Biodegradation of naphthalene-contaminated soils in slurry bioreactors. JOURNAL OF ENVIRONMENTAL ENGINEERING Wang S-Y, Vipulanandan C Wang S-Y, Vipulanandan C. Biodegradation of naphthalene-contaminated soils in slurry bioreactors. Journal of Environmental Engineering 2001;127(8):748-754. R826694C625 (Final)
  • Abstract: ASCE
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Journal Article A unifying ontology to integrate histological and clinical observations for drug-induced liver injury. AMERICAN JOURNAL OF PATHOLOGY Wang Y, Lin Z, Liu Z, Harris S, Kelly R, Zhang J, Ge W, Chen M, Borlak J, Tong W Wang Y, Lin Z, Liu Z, Harris S, Kelly R, Zhang J, Ge W, Chen M, Borlak J, Tong W. A unifying ontology to integrate histological and clinical observations for drug-induced liver injury. American Journal of Pathology 2013;182(4):1180-1187. R835001 (Final)
  • Abstract from PubMed
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  • Abstract: AJP-Abstract
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Journal Article Chemical actinometry: using o-nitrobenzaldehyde to measure lamp intensity in photochemical experiments. JOURNAL OF CHEMICAL EDUCATION Willett KL, Hites RA Willett KL, Hites RA. Chemical actinometry:using o-nitrobenzaldehyde to measure lamp intensity in photochemical experiments. Journal of Chemical Education 2000;77(7):900-902. R825377 (1998)
R825377 (Final)
  • Full-text: ACS-Full Text PDF
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  • Abstract: ACS-Abstract
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Journal Article Determination of polybrominated diphenyl ethers in environmental standard reference materials. ANALYTICAL CHEMISTRY Zhu LY, Hites RA Zhu LY, Hites RA. Determination of polybrominated diphenyl ethers in environmental standard reference materials. Analytical Chemistry 2003;75(23):6696-6700. R830397 (2003)
R830397 (Final)
  • Abstract from PubMed
Journal Article Temporal trends and spatial distributions of brominated flame retardants in archived fishes from the Great Lakes. ENVIRONMENTAL SCIENCE & TECHNOLOGY Zhu LY, Hites RA Zhu LY, Hites RA. Temporal trends and spatial distributions of brominated flame retardants in archived fishes from the Great Lakes. Environmental Science & Technology 2004;38(10):2779-2784. R830397 (2003)
R830397 (Final)
  • Abstract from PubMed
Journal Article Brominated flame retardants in sediment cores from Lakes Michigan and Erie. ENVIRONMENTAL SCIENCE & TECHNOLOGY Zhu LY, Hites RA Zhu LY, Hites RA. Brominated flame retardants in sediment cores from Lakes Michigan and Erie. Environmental Science & Technology 2005;39(10):3488-3494. R830397 (Final)
  • Abstract from PubMed
  • Full-text: ACS Full Text
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Journal Article Identification of brominated carbazoles in sediment cores from Lake Michigan. ENVIRONMENTAL SCIENCE & TECHNOLOGY Zhu LY, Hites RA Zhu LY, Hites RA. Identification of brominated carbazoles in sediment cores from Lake Michigan. Environmental Science & Technology 2005;39(24):9446-9451. R830397 (Final)
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