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Records with

  • Organization = [ORD-NERL]
  • Keyword = Microbiology.
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Records 51 to 75 of 261

Comparison of Cultural and Molecular Fecal Indicator Measurements in Surface Water and Periphyton Biofilms in Artificial Streams
(PRESENTATION) [Presented : Jun 18, 2012]
Studies suggest that periphyton in streambeds can harbor fecal indicator bacteria (FIB) and, under certain circumstances, can be transferred from the periphyton biofilm into the surface water. An indoor mesocosm study was conducted at the U.S. Environmental Protection Agency Expe...
Comparison of enterococci and cow-specific qPAR markers in streams impacted by farms under different management practices
(PRESENTATION) [Presented : Jun 19, 2012]
Nonpoint Sources (NPS) of pollution (e.g., agriculture, wildlife, urban runoff) are major contributors of microbial contaminants to surface waters. However, little is known about the behavior and the effect of environmental determinants on molecular markers of fecal contamination...
Comparison of quantitative PCR assays for Escherichia coli targeting ribosomal RNA and single copy genes
(JOURNAL) [Published : Mar 01, 2011]
Aims: Compare specificity and sensitivity of quantitative PCR (qPCR) assays targeting single and multi-copy gene regions of Escherichia coli. Methods and Results: A previously reported assay targeting the uidA gene (uidA405) was used as the basis for comparing the taxono...
Concentrating Toxoplasma gondii and Cyclospora cayetanensis from Surface Water and Drinking Water by Continuous Separation Channel Centrifugation
(JOURNAL) [Published : Oct 01, 2009]
Aims: To evaluate the effectiveness of continuous separation channel centrifugation for concentrating Toxoplasma gondii and Cyclospora cayetanensis from drinking water and environmental waters. Methods and Results: Ready-to-seed vials with known quantities of Toxoplasma gondii a...
Confirmational identification of Escherichia coli, a comparison of genotypic and phenotypic assays for gluatmate decarbonxylase and B-D-glucuronidase
(JOURNAL) [Published : Sep 01, 1996]
There is no abstract available for this product. If further information is requested, please refer to the bibliographic citation and contact the person listed under Contact field.
Correlation between quantitative PCR and Culture-Based methods for measuring Enterococcus spp. over various temporal scales at three California marine beaches
(JOURNAL) [Published : Feb 01, 2012]
Several studies have examined how fecal indicator bacteria (FIB) measurements compare between quantitative polymerase chain reaction (QPCR) and the culture methods it is intended to replace. Here we extend those studies by examining the stability of that relationship within a be...
Counting Legionella cells within single amoeba host cells
(JOURNAL) [Published : Mar 01, 2012]
Here we present the first attempt to quantify L. pneumophila cell numbers within individual amoebae hosts that may be released into engineered water systems. The maximum numbers of culturable L. pneumophila cells grown within Acanthamoeba polyphaga and Naegleria fowleri were 134...
Cryptosporidium Propidium Monoazide-PCR, a Molecular Biology-Based Technique for Genotyping Viable Cryptosporidium Oocysts
(JOURNAL) [Published : Nov 01, 2009]
Cryptosporidium is an important waterborne protozoan parasite that can cause severe diarrhea and death in the immunocompromised. Current methods to monitor for Cryptosporidium oocysts in water are microscopy-based USEPA Methods 1622 and 1623. These methods assess total levels o...
Cryptosporidium source tracking in the Potomac River watershed - MCEARD
(JOURNAL) [Published : Nov 01, 2008]
To better characterize Cryptosporidium in the Potomac River watershed, a PCR-based genotyping tool was used to analyze 64 base-flow and 28 storm-flow samples from five sites within the watershed. These sites included two water treatment plant intakes as well as three upstream si...
DESIGN AND EVALUATION OF BACTERIODES DNA PROBES FOR THE SPECIFIC DETECTION OF HUMAN FECAL POLLUTION
(JOURNAL) [Published : Apr 01, 1995]
There is no abstract available for this product. If further information is requested, please refer to the bibliographic citation and contact the person listed under Contact field.
DETECTING CCL-RELATED, EMERGING AND REGULATED WATERBORNE HUMAN PROTOZOA FOR EXPOSURE ASSESSMENT
[Published : Apr 25, 2003]
Pathogenic intestinal protozoa (Giardia, Cryptosporidium) are significant etiological agents in the transmission of waterborne disease. Other emerging protozoa are also likely causes of waterborne disease. Toxoplasma gondii has been implicated in causing waterborne disease in N...
DETECTING CCL-RELATED, EMERGING WATERBORNE HUMAN VIRUSES AND VIRAL INDICATORS FOR EXPOSURE ASSESSMENT
[Published : Apr 25, 2003]
Enteric viruses cause waterborne disease outbreaks in the U.S. and worldwide. The primary focus of this task is to develop methods to measure the occurrence of enteric viruses in environmental and drinking waters. Cell culture- and molecular-based methods are being developed fo...
DETECTION AND IDENTIFICATION OF PATHOGENIC CANDIDA SPECIES IN WATER USING FLOW CYTOMETRY COUPLED WITH TAQMAN PCR
(PRESENTATION) [Presented : May 20, 2000]
As the incidence of human fungal infection increases, the ability to detect and identify pathogenic fungi in potential environmental reservoirs becomes increasingly important for disease control. PCR based assays are widely used for diagnostic purposes, but may be inadequate for...
DETECTION BY PCR OF HUMAN ENTERIC VIRUSES CONCENTRATED FROM LARGE VOLUMES OF WATER
(PRESENTATION) [Presented : Jan 15, 2003]
Viruses are recovered and concentrated from water by passage through a positively charged cartridge filter. Following virus elution from the cartridge filter with beef extract and concentration of the beef extract solution, viruses are usually assayed by cell culture. However...
DETECTION OF FECAL ENTEROCOCCI USING A REAL TIME PCR METHOD
(PRESENTATION) [Presented : May 19, 2001]
In spite of their importance in public health, the detection of fecal enterococci is performed via culturing methods that are time consuming and that are subject to inaccuracies that relate to their culturable status. In order to address these problems, a real time PCR (TaqMan) ...
DETECTION OF MICROSPORIDIA IN ENVIRONMENTAL WATERS
(PUBLISHED REPORT) [Published : Sep 01, 2003]
The health effects associated with various waterborne pathogenic microorganisms has been well documented. During the last quarter century protozoan parasites like Giardia and Cryptosporidium have been added to this group. To date, however, the causes of many cases of waterborne...
DETECTION OF PROTOZOA IN WATER
(PRESENTATION) [Presented : Oct 21, 2001]
There is no abstract available for this product. If further information is requested, please refer to the bibliographic citation and contact the person listed under Contact field.
DETECTION OF PROTOZOAN PARASITES IN SOURCE AND FINISHED WATER
(BOOK CHAPTER) [Published : Nov 01, 2001]
There is no abstract available for this product. If further information is requested, please refer to the bibliographic citation and contact the person listed under Contact field.
DETECTION OF PROTOZOAN PARASITES IN SOURCE AND FINISHED WATER - 3RD EDITION ASM'S METHODS IN ENVIRONMENTAL MICROBIOLOGY
(BOOK CHAPTER) [Published : May 01, 2007]
Protozoans are eukaryotic organisms which can live either a free-living or parasitic existence. Some free-living forms, under the right conditions, can become opportunistic parasites. Enteric pathogenic protozoans, like Giardia and Cryptosporidium, which are now known to be tra...
DEVELOPMENT OF AN ASTROVIRUS RT-PCR DETECTION ASSAY FOR USE WITH CONVENTIONAL, REAL-TIME, AND INTEGRATED CELL CULTURE/RT-PCR
(JOURNAL) [Published : Apr 01, 2004]
Astrovirus is a common cause of gastroenteritis in humans that has been determined to be responsible for outbreaks of illness in several countries. Since astrovirus can be waterborne, it is important to be able to identify this virus in environmental water. We have developed an...
DEVELOPMENT OF MULTIPLEX RT-PCR FOR THE DETECTION OF REOVIRUS, HEPATITIS A VIRUS, POLIOVIRUS, NORWALK VIRUS AND ROTAVIRUS
(PRESENTATION) [Presented : May 23, 2004]
Water sources are often found to be contaminated by enteric viruses. This is a public health concern as food and waterborne outbreaks caused by enteric viruses such as noroviruses, rotaviruses, hepatitis A virus (HAV) and enteroviruses are a common occurrence. All of these viru...
DISTRIBUTION OF SIX VIRULENCE FACTORS IN AEROMONAS SPECIES ISOLATED FROM US DRINKING WATER UTILITIES: A PCR IDENTIFICATION
(JOURNAL) [Published : Nov 01, 2004]
Surveys of finished drinking water conducted by the U.S. EPA during 2000-2001, revealed 7 out of 16 water utilities encompassing four states, were contaminated with Aeromonas species. A Polymerase Chain reaction (PCR) based genetic characterization determined the presence of six...
Decay of Fecal Indicator Bacteria and Microbial Source Tracking Markers in Cattle Feces
(PRESENTATION) [Presented : Oct 27, 2012]
The survival of fecal indicator bacteria (FIB) and microbial source tracking (MST) markers in water microcosms and manure amended soils has been well documented; however, little is known about the survival of MST markers in bovine feces deposited on pastures. We conducted a study...
Decay of Fecal Indicator Bacterial Populations and Bovine-Associated Source-Tracking Markers in Freshly Deposited Cow Pats
(JOURNAL) [Published : Jan 01, 2014]
Understanding the survival of fecal indicator bacteria (FIB) and microbial source-tracking (MST) markers is critical to developing pathogen fate and transport models. Although pathogen survival in water microcosms and manure-amended soils is well documented, little is known about...