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Records 1 to 51 of 51

2023
Henderson, W., D. Glinski, C. Coleman, A. Biales, R. Flick, M. Bell, O. Torano, J. Martinson, W. Huang, S. Purucker, AND D. Bencic. Targeted and untargeted metabolomics for deriving benchmark doses (BMDs) in fathead minnows. SETAC North America 44th Annual Meeting, Louisville, KY, November 12 - 16, 2023.
2022
Pilgrim, E., N. Smucker, H. Wu, J. Martinson, C. Nietch, M. Molina, J. Darling, AND B. Johnson. Developing Indicators of Nutrient Pollution in Streams Using 16S rRNA Gene Metabarcoding of Periphyton-Associated Bacteria. WATER. MDPI, Basel, Switzerland, 14(15):2361, (2022). https://doi.org/10.3390/w14152361
Fetke, J., J. Martinson, AND A. Biales. Differential Isoform Usage in Fathead Minnows After Estrogenic Exposure. SETAC, Pittsburgh, PA, November 13 - 17, 2022. https://doi.org/10.23645/epacomptox.21445026
Fetke, J., J. Crago, W. Huang, Mary Jean See, M. Hu, J. Martinson, A. Willis, S. Subbiah, D. Bencic, R. Flick, AND A. Biales. Early life Exposure of Zebrafish to the Neonicotinoid Insecticide, Imidacloprid. SETAC, Pittsburgh, PA, November 13 - 17, 2022. https://doi.org/10.23645/epacomptox.21453606
Villeneuve, D., M. Le, M. Hazemi, A. Biales, D. Bencic, K. Bush, R. Flick, J. Martinson, M. Morshead, K. Santana Rodriguez, K. Vitense, AND K. Flynn. Pilot testing and optimization of a larval fathead minnow high throughput transcriptomics assay. Current Research in Toxicology. Elsevier B.V., Amsterdam, Netherlands, 4:100099, (2022). https://doi.org/10.1016/j.crtox.2022.100099
2021
Hoffman, J., C. Meredith, E. Pilgrim, A. Trebitz, C. Hatzenbuhler, J. Kelly, G. Peterson, J. Lietz, S. Okum, AND J. Martinson. Comparison of larval fish detections using morphology-based taxonomy versus high-throughput sequencing for invasive species early detection. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES. NRC Research Press, Ottawa, Canada, 78(6):752-764, (2021). https://doi.org/10.1139/cjfas-2020-0224
Fetke, J., J. Martinson, R. Flick, W. Huang, Mary Jean See, D. Bencic, E. Pilgrim, R. Debry, AND A. Biales. DNA methylation and expression of estrogen receptor alpha in fathead minnows exposed to 17α-Ethynylestradiol. SETAC Europe, Duluth, MN, May 03 - 06, 2021. https://doi.org/10.23645/epacomptox.14485257
Fetke, J., J. Martinson, R. Flick, W. Huang, Mary Jean See, E. Pilgrim, R. DeBry, AND A. Biales. DNA methylation and expression of estrogen receptor alpha in fathead minnows exposed to 17α-ethynylestradiol. AQUATIC TOXICOLOGY. Elsevier Science Ltd, New York, NY, 233:105788., (2021). https://doi.org/10.1016/j.aquatox.2021.105788
Toth, Greg, J. Martinson, D. Bencic, D. Lattier, M. Kostich, AND A. Biales. Development of omcis biomarkers for estrogen exposure using mRNA, miRNA and piRNAs. AQUATIC TOXICOLOGY. Elsevier Science Ltd, New York, NY, 235:105807, (2021). https://doi.org/10.1016/j.aquatox.2021.105807
Meredith, C., J. Hoffman, A. Trebitz, E. Pilgrim, S. Okum, AND J. Martinson. Evaluating the performance of DNA metabarcoding for assessment of zooplankton communities in Western Lake Superior using multiple markers. Metabarcoding and Metagenomics. Pensoft Publishers, Sofia, Bulgaria, 50:83-97, (2021). https://doi.org/10.3897/mbmg.5.64735
Flynn, K., A. Biales, D. Bencic, R. Flick, J. Martinson, Dan Villeneuve, K. Jensen, J. Cavallin, R. Hockett, T. Norberg-King, M. Le, K. Bush, K. Santana-Rodriguez, AND M. Hazemi. High throughput transcriptomics: A multi-species approach. EPA Board of Scientific Councilors (BOSC) Virtual Meeting, Duluth, MN, February 02 - 05, 2021. https://doi.org/10.23645/epacomptox.13623977
2020
Hoffman, J., C. Meredith, E. Pilgrim, A. Trebitz, C. Hatzenbuhler, J. Kelly, G. Peterson, J. Lietz, S. Okum, AND J. Martinson. DNA metabarcoding-based identification of fish larvae for invasive species early detection. Upper Midwest Invasive Species Conference, Duluth, MN, November 02 - 06, 2020. https://doi.org/10.23645/epacomptox.13231910
Le, M., D. Bencic, A. Biales, R. Flick, J. Martinson, Dan Villeneuve, AND K. Flynn. Effects of volume on acute toxicity and the transcriptome in fathead minnow exposures. SETAC North America, Fort Worth, TX, November 15 - 19, 2020. https://doi.org/10.23645/epacomptox.13182593
Flynn, K., D. Bencic, A. Biales, R. Flick, M. Le, J. Martinson, AND Dan Villeneuve. High throughput exposure methods to support the derivation of transcriptomics-based points of departure for common aquatic toxicity test organisms. SETAC North America, Fort Worth, TX, November 15 - 19, 2020. https://doi.org/10.23645/epacomptox.13242425
Fetke, J., R. Flick, J. Martinson, W. Huang, Mary Jean See, E. Pilgrim, AND A. Biales. Investigating the effects of DNA methylation on EE2 induction of estrogen receptor alpha gene expression in fathead minnows (Pimephales promelas). Society of Integrative and Comparative Biology, Austin, TX, January 03 - 07, 2020.
Darling, J., J. Martinson, K. Pagenkopp-Lohan, K. Carney, E. Pilgrim, A. Banerji, K. Holzer, AND G. Ruiz. Metabarcoding quantifies differences in accumulation of ballast water borne biodiversity among three port systems in the United States. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, Netherlands, 749:141456, (2020). https://doi.org/10.1016/j.scitotenv.2020.141456
Meredith, C., A. Trebitz, J. Hoffman, C. Hatzenbuhler, E. Pilgrim, S. Okum, J. Martinson, AND G. Peterson. Strategies and challenges in detecting non-indigenous species in the Great Lakes. Ecological Society of America Virtual Conference, Salt Lake City, UT, August 02 - 07, 2020.
2019
Biales, A., Greg Toth, J. Martinson, W. Huang, D. Bencic, R. Flick, Mary Jean See, D. Gordon, AND M. Kostich. An overview of the updated and annotated fathead minnow genome. SETAC North America, Toronto, ON, CANADA, November 03 - 07, 2019.
Kostich, M., D. Bencic, R. Flick, J. Martinson, W. Huang, Greg Toth, AND A. Biales. Comparing microarrays to RNA-seq for transcriptomic analysis of whole fathead minnow larvae. SETAC North America, Toronto, ON, CANADA, November 03 - 07, 2019.
Fetke, J., R. Flick, J. Martinson, W. Huang, Mary Jean See, E. Pilgrim, AND A. Biales. DNA Methylation Profile of Estrogen Receptor Alpha in Fish Exposed to EE2. SETAC North America, Toronto, ON, CANADA, November 03 - 07, 2019.
Martinson, J., W. Huang, G. Toth, D. Bencic, R. Flick, D. Lattier, A. Biales, AND M. Kostich. Development and Annotation of Protein Coding Gene Models for the Fathead Minnow Genome. 2019 SETAC North America Annual Meeting, Toronto, CANADA, November 03 - 07, 2019.
Martinson, J., D. Bencic, R. Flick, M. Kostich, W. Huang, D. Lattier, AND A. Biales. Development of Classifiers of Exposure Employing Fathead minnow, including Evaluation of an Alternative, Lower Cost, RNA-seq Library Preparation Method. 2019 SETAC North America Annual Meeting, Toronto, CANADA, November 03 - 07, 2019.
2018
Darling, J., J. Martinson, Y. Gong, S. Okum, E. Pilgrim, K. Pagenkopp Lohan, J. Carney, AND G. Ruiz. Ballast Water Exchange and Invasion Risk Posed by Intracoastal Vessel Traffic: An Evaluation Using High Throughput Sequencing. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, 52(17):9926-9936, (2018). https://doi.org/10.1021/acs.est.8b02108
Pilgrim, E., A. Banerji, J. Darling, C. Hatzenbuhler, J. Hoffman, A. Maloy, J. Martinson, R. Mitchell, C. Meredith, S. Okum, A. Trebitz, AND L. Yuan. How Gene Marker and PCR Primer Choice Influence DNA Metabarcoding of Aquatic Communities. 2018 Society of Freshwater Science Annual Meeting, Detroit, MI, May 20 - 24, 2018.
Trebitz, A., C. Hatzenbuhler, J. Hoffman, C. Meredith, Greg Peterson, J. Martinson, S. Okum, AND E. Pilgrim. Pairing traditional biological assessment with DNA-based tools for AIS early-detection monitoring. Upper Midwest Invasive Species Conference, Rochester, MN, October 15 - 18, 2018.
Banerji, A., M. Bagley, M. Elk, E. Pilgrim, J. Martinson, AND J. Santodomingo. Spatial and temporal dynamics of a freshwater eukaryotic plankton community revealed via 18S rRNA gene metabarcoding. HYDROBIOLOGIA. Springer, New York, NY, 818(1):71-86, (2018). https://doi.org/10.1007/s10750-018-3593-0
Meredith, C., J. Hoffman, A. Trebitz, E. Pilgrim, J. Martinson, AND S. Okum. Using occupancy modeling to compare traditional versus DNA metabarcoding methods for characterizing zooplankton biodiversity. Freshwater Science, Detroit, MI, May 20 - 24, 2018.
2017
Hoffman, J., C. Meredith, A. Trebitz, Greg Peterson, J. Lietz, C. Hatzenbuhler, E. Pilgrim, S. Okum, AND J. Martinson. DNA metabarcoding of fish larvae for detection of non-native fishes. Ichthyologists and Herpetologists Meeting, Austin, TX, July 12 - 16, 2017.
Meredith, C., J. Hoffman, A. Trebitz, Greg Peterson, J. Lietz, C. Hatzenbuhler, E. Pilgrim, S. Okum, AND J. Martinson. Development of DNA-based Identification methods to track the species composition of fish larvae within nearshore areas of the Great Lakes. Minnesota Chapter of the American Fisheries Society, St. Cloud, MN, February 21 - 23, 2017.
Hatzenbuhler, C., J. Kelly, J. Martinson, S. Okum, AND E. Pilgrim. Sensitivity and accuracy of high-throughput metabarcoding methods for early detection of invasive fish species. Scientific Reports. Nature Publishing Group, London, Uk, 7:1-10 (46393), (2017).
2016
Meredith, C., J. Hoffman, A. Trebitz, Greg Peterson, J. Lietz, C. Hatzenbuhler, E. Pilgrim, S. Okum, AND J. Martinson. Benefits and challenges to using DNA-based identification methods: An example study of larval fish from nearshore areas of Lake Superior. Minnesota Society of the American Fisheries Society, Duluth, MN, February 01 - 03, 2016.
Trebitz, A., J. Hoffman, Greg Peterson, E. Pilgrim, J. Martinson, J. Lietz, C. Hatzenbuhler, S. Okum, Y. Zhang, AND C. Meredith. Challenges and progress in making DNA-based AIS early detection monitoring operational. Upper Midwest Invasive Species, La Crosse, WI, October 16 - 19, 2016.
Trebitz, A., J. Hoffman, Greg Peterson, E. Pilgrim, J. Martinson, J. Lietz, C. Hatzenbuhler, S. Okum, Y. Zhang, AND C. Meredith. Challenges and progress in making DNA-based monitoring operational AIS early detection as testbed. International Association for Great Lakes Research, Guelph, ON, CANADA, June 06 - 10, 2016.
Banerji, A., M. Bagley, E. Pilgrim, J. Martinson, S. Guglielmi, Dan Tettenhorst, J. Shoemaker, Joel Allen, C. Nietch, J. Santodomingo, J. Lu, AND Jim Lazorchak. Do Eukaryotic Species Interactions Drive Freshwater HAB Dynamics? SETAC World Congress/ SETAC North America 37th Annual Meeting, Orlando, FL, November 06 - 10, 2016.
Pilgrim, E., S. Okum, J. Martinson, J. Hoffman, Greg Peterson, J. Lietz, AND C. Hatzenbuhler. Expanding Larval Fish DNA Metabarcoding to All the Great Lakes. Upper Midwest Invasive Species Conference, La Crosse, WI, October 16 - 19, 2016.
Nacci, D., D. Proestou, D. Champlin, J. Martinson, AND E. Waits. Genetic basis for rapidly evolved tolerance in the wild: adaptation to toxic pollutants by an estuarine fish species. MOLECULAR ECOLOGY. Blackwell Publishing, Malden, MA, 25(21):5467–5482, (2016).
Meredith, C., J. Hoffman, A. Trebitz, Greg Peterson, J. Lietz, C. Hatzenbuhler, E. Pilgrim, S. Okum, AND J. Martinson. Integrating DNA-based data into bioassessments improves our understanding of species distributions and species habitat relationships. Midwest Invasive Species Conference, La Crosse, WI, October 16 - 19, 2016.
Hatzenbuhler, C., J. Kelly, E. Pilgrim, S. Okum, AND J. Martinson. Sensitivity and accuracy of DNA based methods used to describe aquatic communities for early detection of invasive fish species. Minnesota Society of the American Fisheries Society, Duluth, MN, February 01 - 03, 2016.
Hatzenbuhler, C., J. Hoffman, J. Kelly, J. Lietz, J. Martinson, S. Okum, Greg Peterson, AND E. Pilgrim. Sensitivity and accuracy of high-throughput metabarcoding methods used to describe aquatic communities for early detection of invasve fish species. Society of Freshwater Science, Sacramento, CA, May 20 - 26, 2016.
2015
Nacci, D., D. Champlin, J. Martinson, E. Waits, D. Proestou, S. Karchner, M. Hahn, AND B. Clark. Genetic basis for evolved tolerance to dioxin-like pollutants in wild Atlantic killifish: more than the aryl hydrocarbon receptor. Society of Environmental Toxicology and Chemistry North America (SETAC NA) 36th Annual Meeting, Salt Lake City, UT, November 01 - 05, 2015.
2014
Hoffman, J., E. Pilgrim, A. Trebitz, J. Kelly, Greg Peterson, S. Matthews, AND J. Martinson. Early detection of non-native fishes using next-generation DNA sequencing of fish larvae. Presented at Upper Midwest Invasive Species Conference, Duluth, MN, October 20 - 22, 2014.
Hatzenbuhler, C., J. Kelly, E. Pilgrim, AND J. Martinson. Evaluating non-detection risk associated with metabarcoding approaches for rare metabarcoding approaches. Presented at Upper Midwest Invasive Species Conference, Duluth, MN, October 20 - 23, 2014.
Nacci, D., E. Waits, D. Proestou, D. Champlin, J. Martinson, B. Rinner, AND S. Morris. The Genetic Basis for Evolved Tolerance to Dioxin-Like Compounds in Wild Atlantic Killifish: More Than the Aryl Hydrocarbon Receptor. Society of Environmental Toxicology and Chemistry (SETAC) North America 35th Annual Meeting, Vancouver, BC, CANADA, November 09 - 13, 2014.
2013
Kostich, M., R. Flick, AND J. Martinson. Comparing predicted estrogen concentrations with measurements in US waters. ENVIRONMENTAL POLLUTION. Elsevier Science Ltd, New York, NY, 178(7):271-277, (2013).
2012
PILGRIM, E., S. A. JACKSON, AND J. W. MARTINSON. Applying next-generation DNA sequencing technology to aquatic bioassessment. Presented at EcoSummit 2012, Columbus, OH, September 30 - October 05, 2012.
2011
Lamendella, R., J. W. SANTO-DOMINGO, S. Ghosh, J. W. MARTINSON, AND D. B. Oerther. Comparative Fecal Metagenomics Unveils Unique Functional Capacity of the Swine Gut. BMC Microbiology. BioMed Central Ltd, London, Uk, 11:103-119, (2011).
PILGRIM, E., S. A. JACKSON, J. W. MARTINSON, AND J. DARLING. The future role of next-generation DNA sequencing and metagenetics in aquatic biology monitoring programs. Presented at SETAC Europe, Milan, ITALY, May 14 - 20, 2011.
2010
WAITS, E. R., J. W. MARTINSON, AND K. M. FRITZ. Changes in biodiversity and ecosystem function downstream from mountaintop removal and valley fill coal mining. Presented at SETAC North America 31st Annual Meeting, Portland, OR, November 07 - 11, 2010.
KOSTICH, M., R. W. FLICK, AND J. W. MARTINSON. Modeling environmental loading rates of municipal wastewater contaminants: steroidal estrogens. Presented at SETAC North America 2010 Annual Meeting, Portland, OR, November 07 - 12, 2010.
2005
WYMER, L. J., K. P. BRENNER, J. W. MARTINSON, W. R. STUTTS, S. SCHAUB, AND A. P. DUFOUR. The EMPACT Beaches Project Results from a Study on Microbiological Monitoring in Recreational Waters. U.S. Environmental Protection Agency, Washington, DC, 2005.
2003
Martinson, J, D. Lewis, K Brenner, L Wymer, AND S Brown. INFORMATION MANAGEMENT AND RELATED QUALITY ASSURANCE FOR A LARGE SCALE, MULTI-SITE RESEARCH PROJECT. Presented at The U.S. EPA 20th Annual Conference on Managing Environmental Quality Systems: Quality Management Solutions for Today's Environmental Challenges, New Orleans, LA, April 14-17, 2003.