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2018
Zepp, R., Mike Cyterski, K. Wong, O. Georgacopoulos, Brad Acrey, G. Whelan, R. Parmar, AND M. Molina. Biological Weighting Functions for Evaluating the Role of Sunlight-Induced Inactivation of Coliphages at Selected Beaches and Nearby Tributaries. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, 52(22):13068-13076, (2018). https://doi.org/10.1021/acs.est.8b02191
Whelan, G., K. Kim, R. Parmar, Gerry Laniak, K. Wolfe, M. Galvin, M. Molina, Y. Pachepsky, P. Duda, R. Zepp, L. Prieto, J. Kinzelman, G. Kleinheinz, AND M. Bouchard. Capturing microbial sources distributed in a mixed-use watershed within an integrated environmental modeling workflow. ENVIRONMENTAL MODELLING AND SOFTWARE. Elsevier Science Ltd, New York, NY, 99:126-146, (2018).
Stocker, M., A. Yakirevich, A. Guber, G. Martinez, R. Blaustein, G. Whelan, D. Goodrich, D. Shelton, AND Y. Pachepsky. Functional Evaluation of Three Manure-Borne Indicator Bacteria Release Models with Multiyear Field Experiment Data. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 229:181, (2018). https://doi.org/10.1007/s11270-018-3807-0
Kim, K., G. Whelan, M. Molina, R. Parmar, K. Wolfe, M. Galvin, P. Duda, R. Zepp, J. Kinzelman, G. Kleinheinz, AND M. Borchardt. Using Integrated Environmental Modeling to Assess Sources of Microbial Contamination in Mixed-Use Watersheds. JOURNAL OF ENVIRONMENTAL QUALITY. American Society of Agronomy, MADISON, WI, 47(5):1103-1114, (2018). https://doi.org/10.2134/jeq2018.02.0071
2017
Whelan, G., K. Kim, K. Wolfe, R. Parmar, M. Galvin, M. Molina, AND R. Zepp. Quantitative Microbial Risk Assessment Tutorial - Navigate the SDMPB and Identify an 8-digit HUC of Interest - Updated 2017. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-15/273, 2017.
Whelan, G., K. Wolfe, R. Parmar, M. Galvin, M. Molina, R. Zepp, K. Kim, AND P. Duda. Quantitative Microbial Risk Assessment Tutorial - Primer. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-17/323, 2017.
Whelan, G., R. Parmar, K. Wolfe, M. Galvin, P. Duda, AND M. Gray. Quantitative Microbial Risk Assessment Tutorial - SDMProjectBuilder: Import Local Data Files to Identify and Modify Contamination Sources and Input ParametersUpdated 2017. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-15/316, 2017.
Whelan, G., K. Kim, K. Wolfe, R. Parmar, AND M. Galvin. Quantitative Microbial Risk Assessment Tutorial Installation of Software for Watershed Modeling in Support of QMRA - Updated 2017. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-15/276, 2017.
Kim, K., G. Whelan, K. Wolfe, R. Parmar, M. Galvin, M. Molina, AND R. Zepp. Quantitative Microbial Risk Assessment Tutorial: HSPF Setup, Application, and Calibration of Flows and Microbial Fate and Transport on an Example Watershed. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-17/429, 2017.
2016
Wolfe, K., R. Parmar, G. Whelan, Gerry Laniak, M. Galvin, K. Kim, M. Molina, R. Zepp, P. Duda, AND D. Keiser. A Workflow to Model Microbial Loadings in Watersheds. iEMSs 8th International Congress on Environmental Modelling and Software, Toulouse, FRANCE, July 10 - 14, 2016.
Wolfe, K., R. Parmar, G. Whelan, Gerry Laniak, M. Galvin, K. Kim, M. Molina, R. Zepp, P. Duda, AND D. Keiser. A Workflow to Model Microbial Loadings in Watersheds (proceedings). In Proceedings, 8th International Congress on Environmental Modelling and Software, Toulouse, FRANCE, July 10 - 14, 2016. International Environmental Modelling and Software Society, Manno, Switzerland, 4, (2016).
Parmar, R., K. Wolfe, G. Whelan, Gerry Laniak, M. Galvin, AND J. Goodall. Documenting Models for Interoperability and Reusability. iEMSs 2016, Toulouse, FRANCE, July 10 - 14, 2016.
Parmar, R., K. Wolfe, G. Whelan, Gerry Laniak, M. Galvin, AND J. Goodall. Documenting Models for Interoperability and Reusability (proceedings). In Proceedings, iEMSs 8th International Congress on Environmental Modelling and Software, Toulouse, FRANCE, July 10 - 14, 2016. International Environmental Modelling and Software Society, Manno, Switzerland, 2, (2016).
Zepp, R., G. Whelan, M. Molina, Mike Cyterski, K. Wong, B. Acrey, AND A. Commodore. Impacts of Tributaries on Optical Properties and Singlet Oxygen Concentrations in the Great Lakes. 251st American Chemical Society National Meeting & Exposition, San Diego, CA, March 13 - 17, 2016.
Zepp, R., Mike Cyterski, M. Molina, C. Fitzgerald, G. Whelan, R. Parmar, K. Wolfe, AND M. Galvin. Predictive Modeling of Microbial Indicators for Timely Beach Notifications and Advisories at Marine Beaches. 2016 Recreational Waters Conference, New Orleans, LA, April 12 - 15, 2016.
Zepp, R., M. Molina, Mike Cyterski, G. Whelan, R. Parmar, K. Wong, B. Acrey, AND R. Georgacopoulous. Process Relationships for Evaluating the Role of Light-induced Inactivation of Coliphages at Selected Beaches and Nearby Tributaries of the Great Lakes. 2016 Recreational Waters Conference, New Orleans, LA, April 12 - 15, 2016.
Kim, K., G. Whelan, M. Molina, Tom Purucker, Y. Pachepsky, A. Guber, Mike Cyterski, D. Franklin, AND R. Blaustein. Rainfall-induced release of microbes from manure: model development, parameter estimation, and uncertainty evaluation on small plots. JOURNAL OF WATER AND HEALTH. IWA Publishing, London, Uk, 14(2):wh2016239, (2016).
Kim, K., K. Wolfe, M. Galvin, G. Whelan, AND R. Parmar. SDMProjectBuilder: SWAT Setup for Nutrient Fate and Transport. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-16/065, 2016.
Wolfe, K., M. Galvin, G. Whelan, R. Parmar, AND K. Kim. SDMProjectBuilder: SWAT Simulation and Calibration for Nutrient Fate and Transport. U.S. Environmental Protection Agency, Office of Research and Development, National Center for Environmental Assessment, Washington, DC, EPA/600/B-16/100, 2016.
Park, Y., Y. Pachepsky, D. Shelton, J. Jeong, AND G. Whelan. Survival of Manure-borne Escherichia coli and Fecal Coliforms in Soil: Temperature Dependence as Affected by Site-Specific Factors. JOURNAL OF ENVIRONMENTAL QUALITY. American Society of Agronomy, MADISON, WI, 45(3):949-957, (2016).
2015
Molina, M., G. Whelan, AND Tom Purucker. Effect of Season on the Persistence of Bacterial Pathogens in Runoff from Agricultural Plots. Presented at International Symposium on Waterborne Pathogens, Savannah, GA, April 13 - 14, 2015.
Soller, J., T. Bartrand, J. Ravenscroft, M. Molina, G. Whelan, M. Schoen, AND N. Ashbolt. Estimated human health risks from recreational exposures to stormwater runoff containing animal faecal material. ENVIRONMENTAL MODELLING AND SOFTWARE. Elsevier Science Ltd, New York, NY, 72:21-32, (2015).
Whelan, G. Integrated Environmental Modeling: Quantitative Microbial Risk Assessment. Presented at Western Initiative for Dairy Environment, Boise, ID, February 25 - 26, 2015.
Whelan, G., M. Pelton, M. Molina, R. Zepp, J. Ravenscroft, AND Y. Pachepsky. Microbial Properties Database Editor Tutorial. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-15/275, 2015.
Whelan, G., R. Parmar, AND Gerry Laniak. Microbial Source Module (MSM): Documenting the Science and Software for Discovery, Evaluation, and Integration. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-15/315, 2015.
Whelan, G., R. Parmar, K. Wolfe, M. Galvin, P. Duda, AND M. Gray. Quantitative Microbial Risk Assessment Tutorial – SDMProjectBuilder: Import Local Data Files to Identify and Modify Contamination Sources and Input Parameters. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-15/316, 2015.
Whelan, G., K. Wolfe, R. Parmar, M. Galvin, AND K. Kim. Quantitative Microbial Risk Assessment Tutorial: Installation of Software for Watershed Modeling in Support of QMRA. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-15/276, 2015.
Whelan, G., K. Wolfe, R. Parmar, M. Galvin, M. Molina, R. Zepp, K. Kim, M. Gray, AND P. Duda. Quantitative Microbial Risk Assessment Tutorial: Land-applied Microbial Loadings within a 12-Digit HUC. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-15/298, 2015.
Whelan, G., K. Wolfe, R. Parmar, M. Galvin, M. Molina, R. Zepp, AND K. Kim. Quantitative Microbial Risk Assessment Tutorial: Navigate the SDMPB and Identify an 8-digit HUC of Interest. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-15/273, 2015.
Whelan, G., K. Wolfe, R. Parmar, M. Galvin, M. Molina, R. Zepp, M. Gray, P. Duda, AND K. Kim. Quantitative Microbial Risk Assessment Tutorial: Pour Point Analysis of Land-applied Microbial Loadings and Comparison of Simulated and Gaging Station Results. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-15/290, 2015.
Whelan, G., K. Wolfe, R. Parmar, M. Galvin, M. Molina, M. Gray, AND P. Duda. Quantitative Microbial Risk Assessment Tutorial: Publishing a Microbial Density Time Series as a Txt File. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-15/274, 2015.
Whelan, G., K. Wolfe, R. Parmar, M. Galvin, M. Molina, R. Zepp, M. Gray, P. Duda, AND K. Kim. Quantitative Microbial Risk Assessment Tutorial: Using NLDAS and NCDC Meteorological Data. U.S. EPA Office of Research and Development, Washington, DC, EPA/600/B-15/299, 2015.
Whelan, G. AND O. David. Working Group 1: Software System Design and Implementation for Environmental Modeling (presentation). 2015 Annual General Meeting of the Interagency Steering Committee on Multimedia Environmental Modeling, Davis, CA, October 27 - 28, 2015.
2014
Whelan, G., E. Weber, C. Stevens, M. Pelton, K. Wolfe, R. Parmar, M. Galvin, S. Hilal, AND J. Babendreier. A Chemical Properties Simulator to Support Integrated Environmental Modeling. Presented at th International Congress on Environmental Modelling and Software (iEMSs), San Diego, CA, June 15 - 19, 2014.
Whelan, G., E. Weber, C. Stevens, M. Pelton, K. Wolfe, R. Parmar, M. Galvin, S. Hilal, AND J. Babendreier. A Chemical Properties Simulator to Support Integrated Environmental Modeling (proceeding). In Proceedings, 7th International Congress on Environmental Modelling and Software (iEMSs), San Diego, CA, June 15 - 19, 2014. International Environmental Modelling and Software Society, Manno, Switzerland, 1229-1235, (2014).
Whelan, G., K. Kim, M. Pelton, J. Soller, K. Castleton, M. Molina, Y. Pachepsky, AND R. Zepp. An integrated environmental modeling framework for performing Quantitative Microbial Risk Assessments. ENVIRONMENTAL MODELLING & SOFTWARE. Elsevier Science, New York, NY, 55:77-91, (2014).
Molina, M., Mike Cyterski, G. Whelan, AND R. Zepp. Comparing Data Input Requirements of Statistical vs. Process-based Watershed Models Applied for Prediction of Fecal Indicator and Pathogen Levels in Recreational Beaches. Presented at AGU Fall Meeting, San Francisco, CA, December 15 - 19, 2014.
Pachepsky, Y., R. Blaustein, G. Whelan, AND D. Shelton. Comparing Temperature Effects on E. Coli, Salmonella, and Enterococcus Survival in Surface Waters. Letters in Applied Microbiology. Blackwell Publishing, Malden, MA, , accepted article, (2014).
Whelan, G., K. Kim, M. Pelton, K. Castleton, Gerry Laniak, K. Wolfe, J. Babendreier, R. Parmar, AND M. Galvin. Design of a component-based integrated environmental modeling framework. ENVIRONMENTAL MODELLING & SOFTWARE. Elsevier Science, New York, NY, 55:1-24, (2014).
Guber, A., Y. Pachepsky, A. Yakirevich, D. Skelton, G. Whelan, D. Goodrich, AND C. Unkrich. Modeling runoff and microbial overland transport with KINEROS2/STWIR model: Accuracy and uncertainty as affected by source of infiltration parameters. JOURNAL OF HYDROLOGY. Elsevier Science Ltd, New York, NY, 519 (Part A):644-655, (2014).
Soller, J., T. Bartrand, M. Molina, G. Whelan, M. Schoen, AND N. Ashbolt. Quantitative Microbial Risk Assessment of Freshwater Impacted by Animal Fecal Material. Presented at 8th International Congress on Environmental Modelling and Software (iEMSs), San Diego, CA, June 06, 2013 - June 19, 2014.
Soller, J., T. Bartrand, M. Molina, G. Whelan, M. Schoen, AND N. Ashbolt. Quantitative Microbial Risk Assessment of Freshwater Impacted by Animal Fecal Material (proceedings). In Proceedings, 7th Intl. Congress on Env. Modelling and Software, San Diego, CA, June 15 - 19, 2014. International Environmental Modelling and Software Society, Manno, Switzerland, 1521-1526, (2014).
Martinez, G., Y. Pachepsky, G. Whelan, A. Yakirevich, A. Guber, AND T. Gish. Rainfall-induced fecal indicator organisms transport from manured fields: Model sensitivity analysis. ENVIRONMENTAL INTERNATIONAL. Pergamon Press Ltd., New York, NY, 63:121-129, (2014).
Whelan, G., K. Kim, R. Parmar, K. Wolfe, M. Galvin, P. Duda, M. Gray, M. Molina, R. Zepp, Y. Pachepsky, J. Ravenscroft, L. Prieto, AND B. Kitchens. Using Integrated Environmental Modeling to Automate a Process-Based Quantitative Microbial Risk Assessment (presentation). Presented at International Environmental Modelling and Software Society (iEMSs), San Diego, CA, June 15 - 19, 2014.
Kim, K., K. Price, G. Whelan, M. Galvin, K. Wolfe, P. Duda, M. Gray, AND Y. Pachepsky. Using Remote Sensing and Radar MET Data to Support Watershed Assessments Comprising IEM. In Proceedings, 7th Intl. Congress on Env. Modelling and Software, San Diego, CA, June 15 - 19, 2014. International Environmental Modelling and Software Society, Manno, Switzerland, 940-947, (2014).
Keewook, K., K. Price, G. Whelan, M. Galvin, K. Wolfe, P. Duda, M. Gray, AND Y. Pachepsky. Using Remote Sensing and Radar Meteorological Data to Support Watershed Assessments Comprising Integrated Environmental Modeling. Presented at International Environmental Modelling and Software Society (iEMSs), 7th Intl. Congress on Env. Modelling and Software, San Diego, CA, June 15 - 19, 2014.
Whelan, G., K. Kim, R. Parmar, K. Wolfe, M. Galvin, P. Duda, M. Gray, M. Molina, R. Zepp, Y. Pachepsky, J. Ravenscroft, L. Prieto, AND B. Kitchens. Using integrated environmental modeling to automate a process-based Quantitative Microbial Risk Assessment. In Proceedings, 7th International Congress on Environmental Modelling and Software (iEMSs), San Diego, CA, June 15 - 19, 2014. International Environmental Modelling and Software Society, Manno, Switzerland, 1500-1507, (2014).
Whelan, G. AND O. David. Working Group 1: Software System Design and Implementation for Environmental Modeling. Presented at 013/2014 Annual General Meeting of the Interagency Steering Committee on Multimedia Environmental Modeling, Washington, DC, February 25 - 26, 2014.
2013
Molina, M., G. Whelan, C. Fitzgerald, AND C. Stevens. Aged Manures as Sources of Pathogens in Agricultural Runoff. Presented at American Society for Microbiology, Denver, CO, May 18 - 21, 2013.
Blaustein, R., Y. Pachepsky, R. HIll, D. Shelton, AND G. Whelan. Escherichia coli survival in waters: Temperature dependence. WATER RESEARCH. Elsevier Science Ltd, New York, NY, 47(2):569-578, (2013).
LANIAK, G. F., G. P. OLCHIN, J. GOODALL, A. Vionov, M. Hill, P. Glynn, G. WHELAN, G. Geller, N. Quinn, M. Blind, S. Peckham, S. Reaney, N. GABER, R. Kennedy, AND A. Hughes. Integrated environmental modeling: A vision and roadmap for the future. ENVIRONMENTAL MODELLING AND SOFTWARE. Elsevier Science Ltd, New York, NY, 39:3-23, (2013).
Keewook, K., G. Whelan, Tom Purucker, T. Bohrmann, Mike Cyterski, M. Molina, G. Yin, Y. Pachepsky, A. Guber, AND D. Franklin. Rainfall–runoff model parameter estimation and uncertainty evaluation on small plots. Hydrological Processes. John Wiley & Sons, Ltd., Indianapolis, IN, , online, (2013).
Martinez, G., Y. Pachepsky, D. Shelton, G. WHELAN, R. G. ZEPP, M. MOLINA, AND K. Panhorst. Using the Q10 model to simulate E. coli survival in cowpats on grazing lands. ENVIRONMENT INTERNATIONAL. Elsevier Science Ltd, New York, NY, 54:1-10, (2013).
2012
Whelan, G. 2012 IEMSS Workshop D9 -- The Community for Integrated Environmental Modelling (CIEM): Current Status and Future Direction: Introduction. Presented at 2012 iEMSs Biennium Conference, Leipzig, GERMANY, July 01 - 05, 2012.
Gu, Y., M. Molina, T. Bohrmann, Mike Cyterski, G. Whelan, AND Tom Purucker. Estimation of decay rates for fecal indicator bacteria and bacterial pathogens in agricultural field-applied manure. Presented at Annual Meeting of the Association of Southeastern Biologists, Athens, GA, April 04 - 06, 2012.
WHELAN, G. FRAMES and Other IEM Technologies. Presented at Integrated Environmental Modeling: Lowering the Barriers, Washington, DC, March 19 - 23, 2012.
Moore, R., A. Hughes, N. Gaber, G. Geller, P. Glynn, G. Laniak, A. Voinov, AND G. Whelan. International Summit on Integrated Environmental Modeling. U.S. Environmental Protection Agency, Washington, DC, EPA/600/R/12/728, 2012.
Blaustein, R., Y. Pachepsky, R. Hill, G. Whelan, M. Molina, R. Zepp, AND A. Sadeghi. The Arrhenius Equation As Means to Simulate E. Coli Survival in Waters. Presented at ASA, CSSA, and SSSA International Annual Meeting, Cincinnati, OH, October 21 - 24, 2012.
Whelan, G. AND D. Olaf. Working Group Reports: Working Group 1 - Software Systems Design and Implementation for Environmental Modeling. Presented at 2012 Annual Meeting of the Interagency Steering Committee on Multimedia Environmental Modeling (ISCMEM), Reston, VA, November 07 - 09, 2012.
Laniak, G. AND G. Whelan. Workshop D9. The Community for Integrated Modeling (CIEM): Current Status and future direction. Presented at iEMSs 2012 Workshop, Leipzig, GERMANY, July 01 - 05, 2012.
2011
WHELAN, G. AND O. David. Working Group Reports, Working Group 1, Software System Design and Implementation for Environmental Modeling. Presented at 2011 ISCMEM General Meeting, Rockville, MD, November 28 - 29, 2011.
2010
PURUCKER, S. T., M. E. TRYBY, A. Keats, AND G. WHELAN. Bayesian Composite Receptor Modeling for Bacterial Source Tracking. Presented at 95th ESA Annual Meeting, Pittsburgh, PA, August 01 - 06, 2010.
TRYBY, M. E., S. T. PURUCKER, AND G. WHELAN. Integrated Modeling for Source Characterization of Pathogenic Contamination in Watersheds. In Proceedings, of the 2010 International Congress on Environmental Modelling and Software, Ottawa, ON, CANADA, July 05 - 08, 2010. International Environmental Modelling and Software Society, Manno, Switzerland, S.10.17, (2010).
Droppo, J. G., G. WHELAN, M. E. TRYBY, M. A. Pelton, R. Y. Taira, AND K. E. Dorow. Methods to Register Models and Input/Output Parameters for Integrated Modeling. In Proceedings, of the 2010 International Congress on Environmental Modelling and Software, Ottawa, ON, CANADA, July 05 - 08, 2010. International Environmental Modelling and Software Society, Manno, Switzerland, S.10.21, (2010).
WHELAN, G., M. E. TRYBY, M. A. Pelton, J. A. Soller, AND K. J. Castleton. Using an Integrated, Multi-disciplinary Framework to Support Quantitative Microbial Risk Assessments. In Proceedings, of the 2010 International Congress on Environmental Modelling and Software, Ottawa, ON, CANADA, July 05 - 08, 2010. International Environmental Modelling and Software Society, Manno, Switzerland, S.10.29, (2010).
2009
BARBER, M. C., R. B. AMBROSE, J. E. BABENDREIER, M. J. CYTERSKI, H. E. GOLDEN, C. D. KNIGHTES, S. R. KRAEMER, G. F. LANIAK, N. T. LOUX, R. S. PARMAR, L. M. PRIETO, S. T. PURUCKER, B. RASHLEIGH, L. A. SUAREZ, M. E. TRYBY, G. WHELAN, AND K. L. WOLFE. Forecasting of Services Provided by Stream Ecosystems: Integrated Modeling. Presented at 2009 Mid-Atlantic Stream Restoration Conference, Morgantown, WV, November 03 - 05, 2009.
BARBER, M. C., J. E. BABENDREIER, R. B. AMBROSE, M. J. CYTERSKI, H. E. GOLDEN, C. D. KNIGHTES, S. R. KRAEMER, G. F. LANIAK, N. T. LOUX, R. S. PARMAR, L. M. PRIETO, S. T. PURUCKER, B. RASHLEIGH, L. A. SUAREZ, M. E. TRYBY, G. WHELAN, AND K. L. WOLFE. Integrated Modeling for Watershed Ecosystem Services Assessment and Forecasting. Presented at Millennium Conference 2009: Water-Ecosystem Services, Drought, and Environmental Justice, Athens, GA, November 09 - 12, 2009.
WHELAN, G. Integrated Multi-disciplinary Modeling Capabilities. Presented at EPA Office of Water, Washington, DC, October 16, 2009.
WHELAN, G., M. E. TRYBY, AND J. SOLLER. Source-to-Outcome Microbial Exposure and Risk Modeling Framework. Presented at 19th Annual International Society of Exposure Science Conference, Minneapolis, MN, November 01 - 05, 2009.
JOHNSTON, J. M., G. F. LANIAK, G. WHELAN, D. Ames, AND N. GABER. USEPA’s Ecological Exposure Modeling Science: Frameworks, Components and the Emerging Community of Practice for Reuse. Presented at ISEM 2009 Conference, Quebec City, QC, CANADA, October 06 - 09, 2009.