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2020
McMinn, B., E. Rhodes, E. Webster, AND A. Korajkic. Decay of infectious adenovirus and coliphages in freshwater habitats is differentially affected by ambient sunlight and the presence of indigenous protozoa communities. JOURNAL OF VIROLOGY. American Society for Microbiology, Washington, DC, 17:1, (2020). https://doi.org/10.1186/s12985-019-1274-x
2019
Briggs, S., M. Sivaganesan, O. Shanks, R. Haugland, S. Siefring, M. Varma, K. Oshima, A. Dufour, S. Nappier, AND B. Schnitker. Derivation of the equivalent qPCR value for Escherichia coli to existing culture-based water quality standards for monitoring beaches in Michigan. IWA 20th International Symposium on Health Related Water Microbiology, Vienna, AUSTRIA, September 15 - 20, 2019.
Brinkman, N. Developing Biological Surrogates for Monitoring Treatment Performance of Onsite Non-Potable Water Systems. 2019 UNC Water Microbiology Conference, Chapel Hill, North Carolina, May 13 - 16, 2019.
Wymer, L. Early Warning of Microcystin Criteria Exceedance in Harmful Algal Blooms. 2019 UNC Water Microbiology Conference, Chapel Hill, NC, May 14 - 16, 2019.
Donohue, M. Examining the Relationship Between Total Chlorine Residual to Disinfection By-Products Production and Microbial Control - Raleigh, NC. UNC Microbiology, Raleigh, NC, May 14 - 16, 2019.
Korajkic, A., B. McMinn, N. Ashnolt, M. Sivaganesan, V. Harwood, AND O. Shanks. Extended persistence of cattle derived indicators in subtropical waters. 2019 UNC Water Microbiology Conference, Chapel Hill, NC, May 13 - 16, 2019.
Keely, S., M. Herrmann, A. Korajkic, N. Brinkman, B. McMinn, Shay Fout, AND E. Villegas. Genome Sequences of Escherichia Bacteriophages Isolated from Raw Wastewater. Microbiology Resource Announcements. American Society for Microbiology, Washington, DC, 8(26):e00135-19, (2019). https://doi.org/10.1128/MRA.00135-19
Keely, S. Geospatial Patterns of AMR Genes in 1.2 Million Kilometers of US Rivers and Streams. UNC Water Microbiology Conference 2019, Chapel Hill, NC, May 13 - 16, 2019.
Donohue, M., D. King, S. Pfaller, AND J. Mistry. The sporadic nature of Legionella pneumophila, Legionella pneumophila Sg1 and Mycobacterium avium occurrence within residences and office buildings across 36 states in the United States. JOURNAL OF APPLIED MICROBIOLOGY. Blackwell Publishing, Malden, MA, 126(5):1568-1579, (2019). https://doi.org/10.1111/jam.14196
2018
McMinn, B., S. Klemm, A. Korajkic, M. Herrmann, Rich Haugland, J. Lu, AND E. Villegas. A Constructed Wetland for Treatment of an Impacted Waterway and the Influence of Native Waterfowl on its Perceived Effectiveness. 2018 UNC Water Microbiology Conference, Chapel Hill, North Carolina, May 21 - 24, 2018.
Donohue, M. Legionella and Mycobacterium Occurrence/Persistence in Homes and Office Buildings. 2018 UNC Water Microbiology Conference, Durham, NC, May 22 - 24, 2018.
Haugland, Rich, S. Siefring, E. Anneken, M. Varma, S. Keely, R. Mitchell, AND S. Lehmann. Low Frequencies of Interference to EPA Quantitative Polymerase Chain Reaction (qPCR) Methods for Microbial Water Quality Monitoring in U.S. Rivers and Streams and Coastal Waters. 2018 UNC Water Microbiology Conference, Chapel Hill, NC, May 22 - 24, 2018.
Banerji, A., M. Bagley, M. Elk, E. Pilgrim, J. Martinson, AND J. Santodomingo. Spatial and temporal dynamics of a freshwater eukaryotic plankton community revealed via 18S rRNA gene metabarcoding. HYDROBIOLOGIA. Springer, New York, NY, 818(1):71-86, (2018). https://doi.org/10.1007/s10750-018-3593-0
Oladeinde, A., E. Lipp, C. Chen, R. Muirhead, T. Glenn, K. Cook, AND M. Molina. Transcriptome Changes of Escherichia coli, Enterococcus faecalis, and Escherichia coli O157:H7 Laboratory Strains in Response to Photo-Degraded DOM. Frontiers in Microbiology. Frontiers, Lausanne, Switzerland, 9:882, (2018). https://doi.org/10.3389/fmicb.2018.00882
Korajkic, A., P. Wanjugi, AND V. Harwood. What have we learned after more than 30 years of research into the effects of sunlight, water type, nutrients, temperature and biotic interactions on decay of fecal indicators and pathogens? 2018 UNC Water Microbiology Conference, NC, Chapel Hill, May 22 - 24, 2018.
2017
McMinn, B., N. Ashbolt, AND A. Korajkic. Bacteriophages as indicators of faecal pollution and enteric virus removal. Letters in Applied Microbiology. Blackwell Publishing, Malden, MA, 65(1):11-26, (2017).
Alderiswio, K., L. Villegas, M. Ware, L. McDonald, L. Xiao, AND E. Villegas. Differences in staining intensities affect reported occurrences and concentrations of Giardia spp. in surface drinking water sources. JOURNAL OF APPLIED MICROBIOLOGY. Blackwell Publishing, Malden, MA, 123(6):1607-1613, (2017).
Pfaller, S., V. Tokarev, C. Kessler, C. McLimans, V. Gomez-Alvarez, J. Wright, D. King, AND R. Lamendella. Draft Genome Sequence of Mycobacterium chimaera Type Strain Fl-0169. Genome Announcements. American Society for Microbiology, Washington, DC, 5(8):e01620-16, (2017).
Brinkman, N., Shay Fout, AND S. Keely. Retrospective Surveillance of Wastewater To Examine Seasonal Dynamics of Enterovirus Infections. mSphere. American Society for Microbiology, Washington, DC, 2(3):e00099-17, (2017).
Molina, M., J. Bradshaw, AND B. Snyder. Using Microbial Source Tracking Markers to Predict Occurrence of Waterborne Pathogens in Urban and Agricultural Watershed. FEMS Microbiology Congress 2017, Valencia, SPAIN, July 09 - 13, 2017.
Varughese, E. Water Biosensor Challenge to Address Toxicity of Water. Water Microbiology & Novel Technologies, Philadelphia, PA, August 28 - 30, 2017.
2016
Alum, A., E. Villegas, S. Keely, K. Bright, L. Sifuentes, AND M. Abbaszadegan. Detection of Protozoa in Surface and Finished Waters. Chapter 316, Manual of Environmental Microbiology. ASM Press, Washington, DC, , 3.1.6-1-3.1.6-25, (2016).
Shoemaker, J., Dan Tettenhorst, A. Delacruz, AND Joel Allen. Method Development and Monitoring of Microcystins in Ambient Water. Water Microbiology Conference, Chapel Hill, NC, May 17 - 19, 2016.
Korajkic, A., D. Stoeckel, AND J. Griffith. Validation of Microbial Source Tracking Markers and Detection Protocols: Considerations for Effective Interpretation. Chapter 342, Manual of Environmental Microbiology, Fourth Edition. ASM Press, Washington, DC, , 3.4.2-1-3.4.2-13, (2016).
2015
Buse, H., J. Lu, AND N. Ashbolt. Exposure to synthetic greywater inhibits amoebae encystation and alters expression of Legionella pneumophila virulence genes. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 81(2):630-639, (2015).
Lu, J., I. Struewing, S. Yelton, AND N. Ashbolt. Molecular survey of occurrence and quantity of Legionella spp., Mycobacterium spp., Pseudomonas aeruginosa and amoeba hosts in municipal drinking water storage tank sediments. JOURNAL OF APPLIED MICROBIOLOGY. Blackwell Publishing, Malden, MA, 119(1):278-288, (2015). https://doi.org/10.1111/jam.12831
Ryu, H., L. Boczek, J. Hoelle, AND M. R. Rodgers. On-site applicability of hydrogen peroxide producing microbial electrochemical cells (MECs) coupled with UV in wastewater disinfection study. Presented at Annual Conference American Society for Microbiology, New Orleans, LA, May 30 - June 02, 2015.
2014
Korajkic, A., B. McMinn, O. Shanks, Mano Sivaganesan, Shay Fout, AND N. Ashbolt. Biotic interactions and sunlight affect persistence of fecal indicator bacteria and microbial source tracking genetic markers in the Upper Mississippi River. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 80(13):3952-3961, (2014).
Molina, M., B. Snyder, A. Oladeinde, R. Brown, AND Kelvin Wong. Can We Predict the Behavior of Fecal Indicator and Host-Specific qPCR Markers Using Predictive Modeling in Headwater Streams? Presented at 2014 Water Microbiology Conference: Microbial Contaminants from Watershed to Human Exposure, Durham, NC, May 05 - 09, 2014.
Wong, Kelvin, T. Shaw, A. Oladeinde, AND M. Molina. Changes of Cattle Fecal Microbiome Under Field Conditions. Presented at 2014 Water Microbiology Conference: Microbial Contaminants from Watershed to Human Exposure, Durham, NC, May 05 - 09, 2014.
Wong, Kelvin, T. Shaw, A. Oladeinde, AND M. Molina. Changes of Cattle Fecal Microbiome Under Field Conditions. 2014 Water Microbiology Conference: Microbial Contaminants from Watershed to Human Exposure, Durham, NC, May 05 - 09, 2014.
Pachepsky, Y., R. Blaustein, G. Whelan, AND D. Shelton. Comparing Temperature Effects on E. Coli, Salmonella, and Enterococcus Survival in Surface Waters. Letters in Applied Microbiology. Blackwell Publishing, Malden, MA, , accepted article, (2014).
Oladeinde, A., T. Bohrmann, Kelvin Wong, Tom Purucker, K. Bradshaw, R. Brown, B. Snyder, AND M. Molina. Decay of Fecal Indicator Bacterial Populations and Bovine-Associated Source-Tracking Markers in Freshly Deposited Cow Pats. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 80(1):110-118, (2014).
Wong, Kelvin, T. Shaw, A. Oladeinde, AND M. Molina. Effect of Sunlight on the Divergence of Community Structure of Fecal Bacteria in Cowpats Collected from Three Different Farms. Presented at 2014 Water Microbiology Conference: Microbial Contaminants from Watershed to Human Exposure, Durham, NC, May 05 - 09, 2014.
McMinn, B., A. Korajkic, AND N. Ashbolt. Evaluation of Bacteroides fragilis GB-124 bacteriophages as novel human-associated faecal indicators in the United States. Letters in Applied Microbiology. Blackwell Publishing, Malden, MA, 59(1):115-121, (2014).
SHANKS, O. C., L. PEED, M. SIVAGANESAN, R. A. HAUGLAND, AND E. C. CHERN. Human fecal source identification with real-time quantitative PCR. 2nd, Chapter 7, Paulsen I., Holmes A. (ed.), Environmental Microbiology, Methods in Molecular Biology Series. Humana Press Incorporated, Totowa, NJ, 1096:85-99, (2014).
Lu, J., H. Buse, V. Gomez-Alvarez, I. Struewing, J. Santodomingo, AND N. Ashbolt. Impact of drinking water conditions and copper materials on downstream biofilm microbial communities and legionella pneumophila colonization. JOURNAL OF APPLIED MICROBIOLOGY. Blackwell Publishing, Malden, MA, 117(3):905-918, (2014).
Harwood, V., C. Staley, B. Badgley, K. Borges, AND A. Korajkic. Microbial Source Tracking Markers for Detection of Fecal Contamination in Environmental Waters: Relationships Between Pathogens and Human Health Outcomes. FEMS. Elsevier Science Ltd, New York, NY, 38(1):1-40, (2014).
Buse, H., J. Lu, X. Lu, X. Mou, AND N. Ashbolt. Microbial diversities (16S and 18S rDNA gene pyrosequencing) and environmental pathogens within drinking water biofilms grown on the common premise plumbing materials unplasticized polyvinylchloride and copper. FEMS Microbiology Ecology. Elsevier Science Ltd, New York, NY, 88(2):280-295, (2014).
Oladeinde, A., E. Lipp, AND M. Molina. UV Influence on the Re-Growth of Pathogens in Cow Fecal Extract. Presented at 2014 Water Microbiology Conference: Microbial Contaminants from Watershed to Human Exposure, Durham, NC, May 05 - 07, 2014.
2013
Molina, M., G. Whelan, C. Fitzgerald, AND C. Stevens. Aged Manures as Sources of Pathogens in Agricultural Runoff. Presented at American Society for Microbiology, Denver, CO, May 18 - 21, 2013.
Khajamohiddin, S., A. Porollo, Y. Lam, P. Grimmett, AND J. Yadav. CYP63A2, a catalytically versatile fungal P450 monooxygenase capable of oxidizing higher-molecular-weight polycyclic aromatic hydrocarbons, alkylphenols, and alkanes. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 79(8):2692-2702, (2013).
Brinkman, N., R. Francisco, T. Nichols, D. Robinson, F. Schaefer, P. Schaudies, AND E. Villegas. Detection of Multiple Waterborne Pathogens Using Microsequencing Arrays. JOURNAL OF APPLIED MICROBIOLOGY. Blackwell Publishing, Malden, MA, 114(2):564-573, (2013).
Cashdollar, J., N. Brinkman, S. Griffin, B. Mcminn, E. Rhodes, E. Varughese, A. Grimm, S. Parshionikar, L. Wymer, AND Shay Fout. Development and Evaluation of EPA Method 1615 for Detection of Enterovirus and Norovirus in Water. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 79(1):215-223, (2013).
Ware, M., S. Keely, AND E. Villegas. Development and evaluation of an off-the-slide genotyping technique for identifying Giardia cysts and Cryptosporidium oocysts directly from US EPA Method 1623 slides. JOURNAL OF APPLIED MICROBIOLOGY. Blackwell Publishing, Malden, MA, 115(1):298-309, (2013).
Korajkic, A., B. McMinn, V. Harwood, O. Shanks, Shay Fout, AND N. ASHBOLT. Differential decay of Enterococci and Escherichia coli originating from two fecal pollution sources. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 79(7):2488-2492, (2013).
Flynn, T. M., R. A. Sanford, H. RYU, C. M. Bethke, A. D. Devine, N. ASHBOLT, AND J. W. SANTO-DOMINGO. Functional Microbial Diversity Explains Groundwater Chemistry in a Pristine Aquifer. BMC Microbiology. BioMed Central Ltd, London, Uk, 13:146, (2013).
Lu, J., I. Struewing, H. Buse, J. Kou, H. Shuman, S. Faucher, AND N. ASHBOLT. Legionella pneumophila transcriptional response following exposure to CuO nanoparticles. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 79(8):2713-2720, (2013).
Cashdollar, J. AND L. Wymer. Methods for primary concentration of viruses from water samples: a review and meta-analysis of recent studies. JOURNAL OF APPLIED MICROBIOLOGY. Blackwell Publishing, Malden, MA, 115(1):1-11, (2013).
Lu, J., H. Ryu, J. Vogel, J. Santodomingo, AND N. ASHBOLT. Molecular detection of Campylobacter spp. and fecal indicator bacteria during the northern migration of Sandhill Cranes (Grus canadensis) at the Central Platte River. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 79(12):3762-3769, (2013).
Francy, D., E. Stelzer, J. Duris, A. Brady, J. Harrison, H. Johnson, AND M. Ware. Predictive models for Escherichia coli concentrations at inland lake beaches and relationship of model variables to pathogen detection. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 79(5):1676-1688, (2013).
Dirac, M., K. M. Weigel, M. A. Yakrus, A. L. Becker, H. Chen, G. Fridley, A. Sikora, C. Speake, E. D. HILBORN, S. L. PFALLER, AND G. A. CANGELOSI. Shared Mycobacterium avium genotypes observed among unlinked clinical and environmental isolates. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 79(18):5601-5607, (2013).
Molina, M. Transporte de Patogenos e Indicadore Fecales en Aguas Recreativas: Influencia Urbana o Agricola. Presented at FEM-VI Symposium in Enviromental Microbiology, Gurabo, PR, March 15, 2013.
2012
REVETTA, R. P., V. GOMEZALVAREZ, J. W. SANTO-DOMINGO, T. L. GERKE, AND N. ASHBOLT. Changes in Biofilm Community Structure Associated with Monochloramine-treated Drinking Water Biofilms. Presented at American Society for Microbiology General Meeting, San Francisco, CA, June 16 - 20, 2012.
PEED, L., C. A. KELTY, M. SIVAGANESAN, T. Mooney, C. T. NIETCH, AND O. C. SHANKS. Comparison of Cultural and Molecular Fecal Indicator Measurements in Surface Water and Periphyton Biofilms in Artificial Streams . Presented at American Society of Microbiology 112th General Meeting, San Francisco, CA, June 16 - 19, 2012.
Oladeinde, A., C. Fitzgerald, R. Brown, Kelvin Wong, AND M. Molina. Comparison of enterococci and cow-specific qPAR markers in streams impacted by farms under different management practices. Presented at 112th ASM Annual Meeting, San Francisco, CA, June 18 - 21, 2012.
Converse, R. R., J. F. Griffith, R. T. Noble, R. A. HAUGLAND, K. C. Schiff, AND S. B. Weisberg. Correlation between quantitative PCR and Culture-Based methods for measuring Enterococcus spp. over various temporal scales at three California marine beaches. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 78(4):1237-1242, (2012).
BUSE, H. Y. AND N. ASHBOLT. Counting Legionella cells within single amoeba host cells. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 78(6):2070-2072, (2012).
Oladeinde, A., R. Brown, B. Snyder, K. Bradshaw, T. Bohrmann, C. Wong, AND M. Molina. Decay of Fecal Indicator Bacteria and Microbial Source Tracking Markers in Cattle Feces. Presented at 98th Annual Southeastern American Society for Microbiology Meeting, Athens, GA, October 25 - 27, 2012.
RYU, H., J. LU, J. Vogel, M. Elk, F. Chavez-Ramirez, N. ASHBOLT, AND J. W. SANTO-DOMINGO. Development and Evaluation of a Quantitative PCR Assay Targeting Sandhill Crane (Grus canadensis) Fecal Pollution . APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 78(12):4338-4345, (2012).
RYU, H., M. Henson, M. Elk, S. GLASSMEYER, AND J. W. SANTO-DOMINGO. Development and evaluation of 16S rRNA gene targeting Enterococcus genus- and species-specific assays . Presented at 112th American Society for Microbiology General Meeting, San Francisco, CA, June 16 - 19, 2012.
KELTY, C. A., M. VARMA, M. SIVAGANESAN, R. A. HAUGLAND, AND O. C. SHANKS. Distribution of Genetic Marker Concentrations for Fecal Indicator Bacteria in Sewage and Animal Feces. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 78(12):4225-4232, (2012).
Byappanahalli, M., M. Nevers, A. Korajkic, Z. Staley, AND V. Harwood. Enterococci in the Environment. Microbiology and Molecular Biology Reviews. American Society for Microbiology, Washington, DC, 76(4):685-706, (2012).
WARD, M. D., Y. Chung, L. B. COPELAND, D. L. Doerfler, AND S. J. VESPER. Indoor Molds and Respiratory Hypersensitivity: A Comparison of Selected Molds and House Dust Mite Induced Responses in a Mouse Model**. Chapter 1, Boyd Printing Company (B Print Services, Inc.), Albany, NY, , 222-235, (2012).
Wong, C., B. Mukherjee, M. Molina, R. Zepp, A. Kahler, M. Garcia, AND S. Riblet. Influence of Inorganic Ions and Aggregation and Adsorption Behaviors of Human Adenovirus. Presented at American Society of Microbiology 2012 Annual Conference, San Francisco, CA, June 16 - 21, 2012.
Wong, C., B. Mukherjee, T. Voice, I. Xagoraraki, R. Zepp, AND M. Molina. Influence of Inorganic Ions and Organic Matters on Surface Charge and Adsorption Behaviors of Human Adenovirus. Presented at Annual Southeastern Branch American Society of Microbiology Conference, Athens, GA, October 25 - 27, 2012.
Staley, C., K. V. Gordon, M. E. SCHOEN, AND V. J. Harwood. Performance of two quantitative PCR methods for microbial source tracking of human sewage and implications for microbial risk assessment in recreational waters. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 78(20):7317-7326, (2012).
DAUGHTON, C. G. Real-Time Estimation of Small-Area Populations with Human Biomarkers in Sewage. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier Science Ltd, New York, NY, 414:6-12, (2012).
Converse, R., J. Kinzelman, E. E. HUDGENS, E. A. SAMS, A. P. DUFOUR, AND T. J. WADE. Reductions in Gull Populations Improve Beachwater Quality. Presented at American Society for Microbiology General Meeting, San Francisco, CA, June 16 - 19, 2012.
Smith, C. AND N. ASHBOLT. The fate of Helicobacter pylori phagocytized by Acanthamoeba polyphaga demonstrated by fluorescent in situ hybridization and quantitative polymerization chain reaction tests. CURRENT MICROBIOLOGY. Springer, New York, NY, 65(6):805-812, (2012).
Neumann, N. F., L. Villegas, AND N. ASHBOLT. The genomics revolution and its effect on water quality. JOURNAL OF AMERICAN WATER WORKS ASSOCIATION. American Water Resources Association, Middleburg, VA, 104(1):63-65, (2012).
SANTO-DOMINGO, J. W., M. E. SCHOEN, N. ASHBOLT, AND H. RYU. Using qPCR for Water Microbial Risk Assessments. Chapter 7, M. Filion (ed.), Quantitative Readl-time PCR in Applied Microbiology, ISBN:9781908230010. Caister Academic Press, Norwich, Uk, , ,, (2012).
2011
Lamendella, R., J. W. SANTO-DOMINGO, S. Ghosh, J. W. MARTINSON, AND D. B. Oerther. Comparative Fecal Metagenomics Unveils Unique Functional Capacity of the Swine Gut. BMC Microbiology. BioMed Central Ltd, London, Uk, 11:103-119, (2011).
CHERN, E. C., S. SIEFRING, J. PAAR, M. Doolittle, AND R. A. HAUGLAND. Comparison of quantitative PCR assays for Escherichia coli targeting ribosomal RNA and single copy genes. Letters in Applied Microbiology. Blackwell Publishing, Malden, MA, 52(3):298-306, (2012).
Green, H. C., O. C. SHANKS, M. SIVAGANESAN, R. A. HAUGLAND, AND K. G. Field. Differential Decay of Human Faecal Bacteroides in Marine and Freshwater. Environmental Microbiology. Wiley-Blackwell Publishing, Hoboken, NJ, 13(12):3235-3249, (2011).
BUSE, H. Y. AND N. ASHBOLT. Differential growth of Legionella pneumophila strains within a range of amoebae at various temperatures associated with in-premise plumbing. Letters in Applied Microbiology. Blackwell Publishing, Malden, MA, 53(2):217-224, (2011).
LYE, D. J. AND J. Acosta. Effects of prolonged chlorine exposures upon PCR detection of Helicobacter pylori DNA. CURRENT MICROBIOLOGY. Springer, New York, NY, 62(3):727-732, (2011).
LU, J., H. RYU, J. W. SANTO-DOMINGO, J. F. Griffith, AND N. ASHBOLT. Molecular Detection of Campylobacter spp. in California Gull (Larus californicus) Excreta. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 77(14):5034-5039, (2011).
Nayak, A. P., B. J. Green, E. Janotka, J. M. Hettick, S. Friend, S. J. VESPER, D. Schmechel, AND D. H. Beezhold. Monoclonal Antibodies to Hyphal Exoantigens Derived from the Opportunistic Pathogen Aspergillus terreus. CLINICAL AND VACCINE IMMUNOLOGY. American Society for Microbiology, Washington, DC, 18(9):1568-1576, (2011).
LAU, H. Y., A. BREHM, J. W. SANTO-DOMINGO, AND N. ASHBOLT. Screening-level assays for potentially human-infectious environmental Legionella spp. The Journal of Microbiology . Springer, New York, NY, 49(2):200-207, (2011).
VESPER, S. J. Traditional Mold Analysis Compared to a DNA-based Method of Mold Analysis with Applications in Asthmatics' Homes. CRITICAL REVIEWS IN MICROBIOLOGY. Informa Healthcare, London, Uk, 37(1):15-24, (2011).
2010
HAYES, S. L., D. J. LYE, C. A. McKinstry, AND S. J. VESPER. Aeromonas caviae strain induces Th1 cytokine response in mouse intestinal tract. CANADIAN JOURNAL OF MICROBIOLOGY. NRC Research Press, Ottawa, Canada, 56(1):27-31, (2010).
RYU, H., B. Iker, J. W. SANTO-DOMINGO, M. W. WARE, E. VILLEGAS, AND T. TRAN. A New Sampling Strategy for the Detection of Fecal Bacteria Integrated with USEPA Method 1622/1623 . Presented at American Society for Microbiology 110th General Meeting, San Diego, CA, May 23 - 27, 2010.
MOLINA, M., S. Hunter, E. Duvall, M. J. CYTERSKI, L. PEED, C. A. KELTY, M. SIVAGANESAN, T. Mooney, AND O. C. SHANKS. Assessing the Impact of Urban Runoff in Recreational Beaches in South Carolina and Florida Using Culturable and QPCR Fecal Indicator. Presented at 110th General Meeting of the American Society for Microbiology, San Diego, CA, May 23 - 27, 2010.
Beumer, A., D. N. KING, M. J. DONOHUE, J. Mistry, T. C. COVERT, AND S. L. PFALLER. Detection of Mycobacterium avium subspecies paratuberculosis in Drinking Water and Biofilms Using Quantitative PCR. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 76(21):7367-7370, (2010).
WARE, M. W., S. J. AUGUSTINE, D. ERISMAN, M. J. See, L. J. WYMER, S. L. HAYES, J. P. Dubey, AND E. VILLEGAS. Determining UV Inactivation of Toxoplasma gondii Oocysts by Using Cell Culture and a Mouse Bioassay. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 76(15):5140-5147, (2010).
RYU, H., J. W. SANTO-DOMINGO, J. LU, M. E. SCHOEN, N. ASHBOLT, T. Edge, AND S. Hill. Distribution of Gull Specific Molecular Marker in Coastal Areas of Lake Ontario. Presented at American Society for Microbiology 110th General Meeting, San Diego, CA, May 23 - 27, 2010.
HAUGLAND, R. A., M. VARMA, M. SIVAGANESAN, C. A. KELTY, L. PEED, AND O. C. SHANKS. Evaluation of genetic markers from the 16S rRNA gene V2 region for use in quantitative detection of selected Bacteroidales species and human fecal waste by real time PCR. SYSTEMATIC AND APPLIED MICROBIOLOGY. Elsevier Science Ltd, New York, NY, 33(6):348-357, (2010).
SANTO-DOMINGO, J. W., R. Lamendella, AND N. ASHBOLT. Microbial Source Tracking: Current and Future Molecular Tools in Microbial Water Quality Forensics. Chapter 10, K. Sen and N. Ashbolt (ed.), Environmental Microbiology: Current Technology and Water Applications. ISBN: 978-1-904455-70-7 . Caister Academic Press, Norwich, Uk, , c. 310, (2010).
KELTY, C. A., K. M. WHITE, J. C. BLANNON, M. C. MECKES, O. C. SHANKS, M. SIVAGANESAN, M. VARMA, AND R. A. HAUGLAND. Single Laboratory Comparison of Quantitative Real-time PCR Assays for the Detection of Fecal Pollution. Presented at American Society for Microbiology 110th General Meeting, San Diego, CA, May 23 - 27, 2010.
Francy, D. S., R. N. Bushon, C. M. Kephart, A. M. Brady, E. E. Bertke, E. Stelzer, E. E. Bertke, F. W. SCHAEFER, AND H. LINDQUIST. Statistical assessment of DNA extraction reagent lot variability in real-time quantitative PCR. Letters in Applied Microbiology. Blackwell Publishing, Malden, MA, 50(3):276-282, (2010).
Green, H. C., O. C. SHANKS, M. SIVAGANESAN, R. A. HAUGLAND, AND K. G. Field. The Effects of Water Matrix on Decay of Human Fecal Molecular Markers and Campylobacter spp. Presented at American Society for Microbiology 110th General Meeting, San Diego, CA, May 23 - 27, 2010.
Parshionikar, S., I. Laseke, AND Shay Fout. Use of propidium monoazide in reverse transcriptase PCR to distinguish between infectious and noninfectious enteric viruses in water samples. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 76(13):4318-4326, (2010).
2009
ARAUJO, R., R. S. DYER, R. C. FORTMANN, F. A. FULK, F. S. HAUCHMAN, D. T. HEGGEM, S. T. RAO, M. R. RODGERS, L. S. SHELDON, AND E. J. WEBER. A Conceptual Framework for U.S. EPA’s National Exposure Research Laboratory. U.S. Environmental Protection Agency, Washington, DC, EPA/600/R-09/003 (NTIS PB2010-103951), 2009.
LYE, D. J. A Mouse Model for Characterization of Gastrointestinal Colonization Rates Among Environmental Aeromonas Isolates. CURRENT MICROBIOLOGY. Springer, New York, NY, 58(5):454-458, (2009).
PEED, L., C. T. NIETCH, C. A. KELTY, K. M. WHITE, J. C. BLANNON, M. C. MECKES, T. Mooney, M. SIVAGANESAN, R. A. HAUGLAND, AND O. C. SHANKS. Combining watershed attributes with culture- and PCR-based methods for improved characterization and management of fecal pollution. Presented at American Society for Microbiology 109th General Meeting, Philadelphia, PA, May 17 - 21, 2009.
Borchardt, M., S. Spencer, P. D. Bertz, M. W. WARE, J. P. Dubey, AND H. LINDQUIST. Concentrating Toxoplasma gondii and Cyclospora cayetanensis from Surface Water and Drinking Water by Continuous Separation Channel Centrifugation. JOURNAL OF APPLIED MICROBIOLOGY. Blackwell Publishing, Malden, MA, 107(4):1089-1097, (2009).
Borchardt, M. A., S. K. spencer, P. D. Bertz, M. W. WARE, AND H. LINDQUIST. Concentrating Toxoplasma gondii and Cyclospora cayetanensis from surfacewater and drinking water by continuous separation channel centrifugation. JOURNAL OF APPLIED MICROBIOLOGY. Blackwell Publishing, Malden, MA, 107(4):1089-97, (2009).
Brescia, C., S. Hunt, M. W. WARE, E. VARUGHESE, A. EGOROV, AND E. VILLEGAS. Cryptosporidium Propidium Monoazide-PCR, a Molecular Biology-Based Technique for Genotyping Viable Cryptosporidium Oocysts . APPLIED AND ENVIRONMENTAL MICROBIOLOGY. American Society for Microbiology, Washington, DC, 75(21):6856-6863, (2009).
Yang, W., H. LINDQUIST, V. Cama, F. W. SCHAEFER, E. VILLEGAS, R. Fayer, E. J. Lewis, Y. Feng, AND L. Xiao. Detection of Toxoplasma gondii oocuysts in water sample concentrates by real-time PCR. Journal of Environmental Microbiology. Blackwell Publishing, Malden, MA, 75(11):0099-2240, (2009).